Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 AL355802.2-201ENST00000402069 882 ntBASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRAT1Q6PJG6 AL049796.1-201ENST00000565336 1766 ntBASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
BRAT1Q6PJG6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 FEM1AP4-201ENST00000443167 1987 ntBASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.73■□□□□ 0.91
BRAT1Q6PJG6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 MIPEPP3-201ENST00000412105 444 ntBASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRAT1Q6PJG6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 MIR4758-201ENST00000577688 71 ntBASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 AC011484.1-201ENST00000377652 1995 ntBASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRAT1Q6PJG6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
BRAT1Q6PJG6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms