Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 AC012414.1-201ENST00000556676 535 ntBASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 LTB4R2-202ENST00000528054 3092 ntBASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
TMEM53Q6P2H8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM53Q6P2H8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 AC005082.1-201ENST00000413042 2259 ntBASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM53Q6P2H8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM53Q6P2H8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM53Q6P2H8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TMEM53Q6P2H8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 AC018445.3-201ENST00000624177 1945 ntBASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM53Q6P2H8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms