Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.83■□□□□ 0.93
CAPRIN2Q6IMN6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.83■□□□□ 0.92
CAPRIN2Q6IMN6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.92
CAPRIN2Q6IMN6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.92
CAPRIN2Q6IMN6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 AC004854.2-201ENST00000608450 1441 ntBASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPRIN2Q6IMN6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 KRT87P-202ENST00000534226 1464 ntBASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 AC087289.5-201ENST00000586076 3175 ntBASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPRIN2Q6IMN6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 IKBKGP1-201ENST00000612193 1073 ntBASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPRIN2Q6IMN6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CAPRIN2Q6IMN6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CAPRIN2Q6IMN6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms