Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.71■□□□□ 0.75
GARNL3Q5VVW2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 AF201337.1-201ENST00000520239 748 ntBASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.7■□□□□ 0.74
GARNL3Q5VVW2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 AL512625.2-201ENST00000417533 625 ntBASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 AC083906.2-201ENST00000511578 360 ntBASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
GARNL3Q5VVW2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 RARRES2P4-201ENST00000514074 484 ntBASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GARNL3Q5VVW2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 AC007322.3-201ENST00000426526 701 ntBASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 AL109923.1-201ENST00000618799 583 ntBASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GARNL3Q5VVW2 RNF165-205ENST00000588679 2904 ntBASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 AC116050.2-201ENST00000612102 1779 ntBASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 HLA-L-209ENST00000420110 1011 ntBASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 AC105036.2-201ENST00000569468 176 ntBASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GARNL3Q5VVW2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 TSPY6P-201ENST00000448518 926 ntBASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 AC104771.1-201ENST00000603335 964 ntBASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 AC016405.3-201ENST00000607710 860 ntBASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GARNL3Q5VVW2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms