Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 AC133561.4-201ENST00000566112 224 ntBASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 PLK5-205ENST00000642079 1969 ntBASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
LCN1P1Q5VSP4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 AC126544.1-201ENST00000580842 1059 ntBASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LCN1P1Q5VSP4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 IGHV3-19-201ENST00000521488 291 ntBASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 MIR4767-201ENST00000582827 78 ntBASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 AC233992.3-201ENST00000607491 485 ntBASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
LCN1P1Q5VSP4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LCN1P1Q5VSP4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.6■□□□□ 0.57
LCN1P1Q5VSP4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms