Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
CBWD6Q4V339 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.38■■□□□ 1.17
CBWD6Q4V339 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CBWD6Q4V339 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.38■■□□□ 1.17
CBWD6Q4V339 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CBWD6Q4V339 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CBWD6Q4V339 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CBWD6Q4V339 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
CBWD6Q4V339 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.37■■□□□ 1.17
CBWD6Q4V339 AC091799.1-201ENST00000422823 811 ntBASIC22.37■■□□□ 1.17
CBWD6Q4V339 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.37■■□□□ 1.17
CBWD6Q4V339 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.37■■□□□ 1.17
CBWD6Q4V339 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.37■■□□□ 1.17
CBWD6Q4V339 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.37■■□□□ 1.17
CBWD6Q4V339 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CBWD6Q4V339 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CBWD6Q4V339 AC243732.1-201ENST00000612648 864 ntBASIC22.37■■□□□ 1.17
CBWD6Q4V339 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CBWD6Q4V339 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CBWD6Q4V339 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CBWD6Q4V339 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
CBWD6Q4V339 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CBWD6Q4V339 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CBWD6Q4V339 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CBWD6Q4V339 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CBWD6Q4V339 AC137761.2-201ENST00000561729 223 ntBASIC22.36■■□□□ 1.17
CBWD6Q4V339 AC145350.3-201ENST00000569033 163 ntBASIC22.36■■□□□ 1.17
CBWD6Q4V339 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CBWD6Q4V339 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.36■■□□□ 1.17
CBWD6Q4V339 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.36■■□□□ 1.17
CBWD6Q4V339 FEM1AP1-201ENST00000431297 1995 ntBASIC22.36■■□□□ 1.17
CBWD6Q4V339 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CBWD6Q4V339 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CBWD6Q4V339 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CBWD6Q4V339 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CBWD6Q4V339 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CBWD6Q4V339 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CBWD6Q4V339 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CBWD6Q4V339 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 MIR935-201ENST00000401179 91 ntBASIC22.34■■□□□ 1.17
CBWD6Q4V339 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CBWD6Q4V339 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CBWD6Q4V339 AC007225.1-201ENST00000566331 1836 ntBASIC22.34■■□□□ 1.17
CBWD6Q4V339 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CBWD6Q4V339 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CBWD6Q4V339 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CBWD6Q4V339 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CBWD6Q4V339 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.33■■□□□ 1.17
CBWD6Q4V339 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CBWD6Q4V339 AC116050.2-201ENST00000612102 1779 ntBASIC22.33■■□□□ 1.16
CBWD6Q4V339 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CBWD6Q4V339 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.32■■□□□ 1.16
CBWD6Q4V339 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.32■■□□□ 1.16
CBWD6Q4V339 AC006015.1-201ENST00000429970 570 ntBASIC22.32■■□□□ 1.16
CBWD6Q4V339 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
CBWD6Q4V339 AC073314.1-201ENST00000568729 2216 ntBASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms