Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 KRT19P1-201ENST00000405746 1186 ntBASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 KRT18P20-201ENST00000548986 1279 ntBASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 MIR6821-201ENST00000617625 74 ntBASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 LINC01006-201ENST00000333319 2292 ntBASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SNAI3Q3KNW1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 AC034268.1-201ENST00000441047 882 ntBASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SNAI3Q3KNW1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 NTF6G-201ENST00000591094 616 ntBASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.91■□□□□ 0.46
SNAI3Q3KNW1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 AC073314.1-201ENST00000568729 2216 ntBASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 AC092667.1-201ENST00000434301 2586 ntBASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 AC007225.1-201ENST00000566331 1836 ntBASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAI3Q3KNW1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SNAI3Q3KNW1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 FP700111.2-201ENST00000619190 1892 ntBASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 UBE2DNL-204ENST00000602536 740 ntBASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAI3Q3KNW1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms