Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 AC004911.1-201ENST00000416316 871 ntBASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 AL137784.2-201ENST00000607332 1000 ntBASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRICKLE4Q2TBC4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRICKLE4Q2TBC4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 AC007322.3-201ENST00000426526 701 ntBASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 AL591742.1-201ENST00000604433 565 ntBASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRICKLE4Q2TBC4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 CDV3P1-201ENST00000471403 739 ntBASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRICKLE4Q2TBC4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 AL162412.1-201ENST00000567129 965 ntBASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 AC231657.2-201ENST00000624556 255 ntBASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRICKLE4Q2TBC4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 AC080038.1-201ENST00000611274 1154 ntBASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.23■□□□□ 0.67
PRICKLE4Q2TBC4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms