Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.12■■□□□ 1.61
RFX7Q2KHR2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RFX7Q2KHR2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFX7Q2KHR2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFX7Q2KHR2 MIR4758-201ENST00000577688 71 ntBASIC25.11■■□□□ 1.61
RFX7Q2KHR2 AC069236.1-201ENST00000604339 616 ntBASIC25.11■■□□□ 1.61
RFX7Q2KHR2 AC083880.1-201ENST00000608266 535 ntBASIC25.11■■□□□ 1.61
RFX7Q2KHR2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.11■■□□□ 1.61
RFX7Q2KHR2 MYC-209ENST00000641252 345 ntBASIC25.11■■□□□ 1.61
RFX7Q2KHR2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFX7Q2KHR2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 TMEM191A-211ENST00000637163 1067 ntBASIC25.1■■□□□ 1.61
RFX7Q2KHR2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFX7Q2KHR2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.1■■□□□ 1.61
RFX7Q2KHR2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 AC005229.4-201ENST00000610085 2198 ntBASIC25.09■■□□□ 1.61
RFX7Q2KHR2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.09■■□□□ 1.61
RFX7Q2KHR2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RFX7Q2KHR2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
RFX7Q2KHR2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 AC091799.1-201ENST00000422823 811 ntBASIC25.07■■□□□ 1.6
RFX7Q2KHR2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
RFX7Q2KHR2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 RARRES2P4-201ENST00000514074 484 ntBASIC25.06■■□□□ 1.6
RFX7Q2KHR2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.06■■□□□ 1.6
RFX7Q2KHR2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 AC010980.2-201ENST00000587099 1412 ntBASIC25.05■■□□□ 1.6
RFX7Q2KHR2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
RFX7Q2KHR2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.04■■□□□ 1.6
RFX7Q2KHR2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms