Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SYPL1Q16563 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYPL1Q16563 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYPL1Q16563 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.23■□□□□ 0.67
SYPL1Q16563 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYPL1Q16563 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SYPL1Q16563 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.22■□□□□ 0.67
SYPL1Q16563 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SYPL1Q16563 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SYPL1Q16563 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 YBX1P1-201ENST00000445822 960 ntBASIC19.22■□□□□ 0.67
SYPL1Q16563 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.22■□□□□ 0.67
SYPL1Q16563 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.22■□□□□ 0.67
SYPL1Q16563 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.22■□□□□ 0.67
SYPL1Q16563 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.22■□□□□ 0.67
SYPL1Q16563 TERF1P2-201ENST00000583350 1212 ntBASIC19.22■□□□□ 0.67
SYPL1Q16563 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SYPL1Q16563 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.22■□□□□ 0.67
SYPL1Q16563 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYPL1Q16563 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.21■□□□□ 0.67
SYPL1Q16563 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.21■□□□□ 0.67
SYPL1Q16563 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SYPL1Q16563 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SYPL1Q16563 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.21■□□□□ 0.67
SYPL1Q16563 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.21■□□□□ 0.67
SYPL1Q16563 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.21■□□□□ 0.67
SYPL1Q16563 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.21■□□□□ 0.67
SYPL1Q16563 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.21■□□□□ 0.67
SYPL1Q16563 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.21■□□□□ 0.67
SYPL1Q16563 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.21■□□□□ 0.67
SYPL1Q16563 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 KRT16P2-201ENST00000414673 1423 ntBASIC19.21■□□□□ 0.67
SYPL1Q16563 ZNRF2P3-201ENST00000424200 374 ntBASIC19.21■□□□□ 0.67
SYPL1Q16563 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SYPL1Q16563 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 SLC7A5P2-201ENST00000553010 536 ntBASIC19.21■□□□□ 0.67
SYPL1Q16563 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.21■□□□□ 0.67
SYPL1Q16563 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.21■□□□□ 0.67
SYPL1Q16563 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SYPL1Q16563 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYPL1Q16563 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
SYPL1Q16563 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
SYPL1Q16563 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYPL1Q16563 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.2■□□□□ 0.66
SYPL1Q16563 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.2■□□□□ 0.66
SYPL1Q16563 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.2■□□□□ 0.66
SYPL1Q16563 CCDC92B-201ENST00000575506 885 ntBASIC19.2■□□□□ 0.66
SYPL1Q16563 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SYPL1Q16563 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.2■□□□□ 0.66
SYPL1Q16563 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
SYPL1Q16563 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYPL1Q16563 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYPL1Q16563 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYPL1Q16563 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SYPL1Q16563 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYPL1Q16563 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYPL1Q16563 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.19■□□□□ 0.66
SYPL1Q16563 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SYPL1Q16563 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYPL1Q16563 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYPL1Q16563 KRT18P14-201ENST00000534205 1250 ntBASIC19.19■□□□□ 0.66
SYPL1Q16563 DUX4L2-201ENST00000561772 1275 ntBASIC19.19■□□□□ 0.66
SYPL1Q16563 AP001160.3-201ENST00000601484 763 ntBASIC19.19■□□□□ 0.66
SYPL1Q16563 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYPL1Q16563 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.19■□□□□ 0.66
SYPL1Q16563 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
SYPL1Q16563 AC120498.10-201ENST00000621827 505 ntBASIC19.19■□□□□ 0.66
SYPL1Q16563 DUX4L6-201ENST00000626483 1275 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms