Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YLR012CYLR012C 300 nt2.9□□□□□ -1.95
VPS38Q05919 MSN1YOL116W 1149 nt2.9□□□□□ -1.95
VPS38Q05919 RSN1YMR266W 2862 nt2.9□□□□□ -1.95
VPS38Q05919 DSE4YNR067C 3354 nt2.89□□□□□ -1.95
VPS38Q05919 snR59snR59 78 nt2.89□□□□□ -1.95
VPS38Q05919 RSR1YGR152C 819 nt2.89□□□□□ -1.95
VPS38Q05919 NDT80YHR124W 1884 nt2.89□□□□□ -1.95
VPS38Q05919 PBS2YJL128C 2007 nt2.89□□□□□ -1.95
VPS38Q05919 ATG3YNR007C 933 nt2.89□□□□□ -1.95
VPS38Q05919 MRS2YOR334W 1413 nt2.89□□□□□ -1.95
VPS38Q05919 LOA1YPR139C 903 nt2.89□□□□□ -1.95
VPS38Q05919 NMA111YNL123W 2994 nt2.89□□□□□ -1.95
VPS38Q05919 DBP10YDL031W 2988 nt2.88□□□□□ -1.95
VPS38Q05919 KIN82YCR091W 2163 nt2.88□□□□□ -1.95
VPS38Q05919 YPL150WYPL150W 2706 nt2.88□□□□□ -1.95
VPS38Q05919 SRB8YCR081W 4284 nt2.88□□□□□ -1.95
VPS38Q05919 SEN54YPL083C 1404 nt2.88□□□□□ -1.95
VPS38Q05919 NCB2YDR397C 441 nt2.88□□□□□ -1.95
VPS38Q05919 ERG28YER044C 447 nt2.88□□□□□ -1.95
VPS38Q05919 LRP1YHR081W 555 nt2.88□□□□□ -1.95
VPS38Q05919 BAT1YHR208W 1182 nt2.88□□□□□ -1.95
VPS38Q05919 SDL1YIL167W 633 nt2.88□□□□□ -1.95
VPS38Q05919 YKL033W-AYKL033W-A 711 nt2.88□□□□□ -1.95
VPS38Q05919 YLR230WYLR230W 306 nt2.88□□□□□ -1.95
VPS38Q05919 AIM36YMR157C 768 nt2.88□□□□□ -1.95
VPS38Q05919 SHE4YOR035C 2370 nt2.88□□□□□ -1.95
VPS38Q05919 YRR1YOR162C 2433 nt2.88□□□□□ -1.95
VPS38Q05919 CDC55YGL190C 1581 nt2.87□□□□□ -1.95
VPS38Q05919 ALY1YKR021W 2748 nt2.87□□□□□ -1.95
VPS38Q05919 SEC26YDR238C 2922 nt2.87□□□□□ -1.95
VPS38Q05919 APC11YDL008W 498 nt2.87□□□□□ -1.95
VPS38Q05919 PEA2YER149C 1263 nt2.87□□□□□ -1.95
VPS38Q05919 YMR173W-AYMR173W-A 1185 nt2.87□□□□□ -1.95
VPS38Q05919 YOL085W-AYOL085W-A 213 nt2.87□□□□□ -1.95
VPS38Q05919 snR191snR191 274 nt2.87□□□□□ -1.95
VPS38Q05919 CYR1YJL005W 6081 nt2.87□□□□□ -1.95
VPS38Q05919 GAL80YML051W 1308 nt2.87□□□□□ -1.95
VPS38Q05919 YDR029WYDR029W 315 nt2.86□□□□□ -1.95
VPS38Q05919 SLX9YGR081C 633 nt2.86□□□□□ -1.95
VPS38Q05919 YGR228WYGR228W 345 nt2.86□□□□□ -1.95
VPS38Q05919 YGR293CYGR293C 462 nt2.86□□□□□ -1.95
VPS38Q05919 TCD1YHR003C 1290 nt2.86□□□□□ -1.95
VPS38Q05919 BUD19YJL188C 309 nt2.86□□□□□ -1.95
VPS38Q05919 APC9YLR102C 798 nt2.86□□□□□ -1.95
VPS38Q05919 YLR224WYLR224W 1110 nt2.86□□□□□ -1.95
VPS38Q05919 ILV5YLR355C 1188 nt2.86□□□□□ -1.95
VPS38Q05919 PDP3YLR455W 915 nt2.86□□□□□ -1.95
VPS38Q05919 INP1YMR204C 1263 nt2.86□□□□□ -1.95
VPS38Q05919 HEM4YOR278W 828 nt2.86□□□□□ -1.95
VPS38Q05919 GIN4YDR507C 3429 nt2.86□□□□□ -1.95
VPS38Q05919 YDR210W-AYDR210W-A 1317 nt2.86□□□□□ -1.95
VPS38Q05919 RSE1YML049C 4086 nt2.86□□□□□ -1.95
VPS38Q05919 YOL057WYOL057W 2136 nt2.86□□□□□ -1.95
VPS38Q05919 SAP1YER047C 2694 nt2.86□□□□□ -1.95
VPS38Q05919 IKI3YLR384C 4050 nt2.85□□□□□ -1.95
VPS38Q05919 YEL1YBL060W 2064 nt2.85□□□□□ -1.95
VPS38Q05919 YHR086W-AYHR086W-A 162 nt2.85□□□□□ -1.95
VPS38Q05919 YAP5YIR018W 738 nt2.85□□□□□ -1.95
VPS38Q05919 SYS1YJL004C 612 nt2.85□□□□□ -1.95
VPS38Q05919 YOR169CYOR169C 465 nt2.85□□□□□ -1.95
VPS38Q05919 MEI5YPL121C 669 nt2.85□□□□□ -1.95
VPS38Q05919 AYT1YLL063C 1425 nt2.85□□□□□ -1.95
VPS38Q05919 YDL187CYDL187C 330 nt2.84□□□□□ -1.95
VPS38Q05919 YGR242WYGR242W 309 nt2.84□□□□□ -1.95
VPS38Q05919 RLP24YLR009W 600 nt2.84□□□□□ -1.95
VPS38Q05919 MPP6YNR024W 561 nt2.84□□□□□ -1.95
VPS38Q05919 ARF3YOR094W 552 nt2.84□□□□□ -1.95
VPS38Q05919 YPR014CYPR014C 330 nt2.84□□□□□ -1.95
VPS38Q05919 RPO41YFL036W 4056 nt2.84□□□□□ -1.96
VPS38Q05919 AI2Q0055 2565 nt2.83□□□□□ -1.96
VPS38Q05919 YHR078WYHR078W 1659 nt2.83□□□□□ -1.96
VPS38Q05919 IRC2YDR112W 309 nt2.83□□□□□ -1.96
VPS38Q05919 VPS74YDR372C 1038 nt2.83□□□□□ -1.96
VPS38Q05919 SCEIQ0160 708 nt2.83□□□□□ -1.96
VPS38Q05919 PRS3YHL011C 963 nt2.83□□□□□ -1.96
VPS38Q05919 YIL054WYIL054W 318 nt2.83□□□□□ -1.96
VPS38Q05919 CSE4YKL049C 690 nt2.83□□□□□ -1.96
VPS38Q05919 YBR071WYBR071W 636 nt2.83□□□□□ -1.96
VPS38Q05919 AFR1YDR085C 1863 nt2.83□□□□□ -1.96
VPS38Q05919 CTF13YMR094W 1437 nt2.83□□□□□ -1.96
VPS38Q05919 RGR1YLR071C 3249 nt2.83□□□□□ -1.96
VPS38Q05919 NET1YJL076W 3570 nt2.82□□□□□ -1.96
VPS38Q05919 YDR193WYDR193W 399 nt2.82□□□□□ -1.96
VPS38Q05919 RPS26BYER131W 360 nt2.82□□□□□ -1.96
VPS38Q05919 STE18YJR086W 333 nt2.82□□□□□ -1.96
VPS38Q05919 YAL037WYAL037W 804 nt2.82□□□□□ -1.96
VPS38Q05919 MRP49YKL167C 414 nt2.82□□□□□ -1.96
VPS38Q05919 RPL8BYLL045C 771 nt2.82□□□□□ -1.96
VPS38Q05919 SDO1YLR022C 753 nt2.82□□□□□ -1.96
VPS38Q05919 TAP42YMR028W 1101 nt2.82□□□□□ -1.96
VPS38Q05919 YOR283WYOR283W 693 nt2.82□□□□□ -1.96
VPS38Q05919 YPL068CYPL068C 882 nt2.82□□□□□ -1.96
VPS38Q05919 MRD1YPR112C 2664 nt2.82□□□□□ -1.96
VPS38Q05919 SOK1YDR006C 2706 nt2.82□□□□□ -1.96
VPS38Q05919 ORC1YML065W 2745 nt2.81□□□□□ -1.96
VPS38Q05919 snR84snR84 550 nt2.81□□□□□ -1.96
VPS38Q05919 YDR537CYDR537C 606 nt2.81□□□□□ -1.96
VPS38Q05919 YMR187CYMR187C 1296 nt2.81□□□□□ -1.96
VPS38Q05919 RPL20AYMR242C 519 nt2.81□□□□□ -1.96
VPS38Q05919 YOR364WYOR364W 369 nt2.81□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms