Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.78■□□□□ 0.92
PRAMEP78395 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.78■□□□□ 0.92
PRAMEP78395 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PRAMEP78395 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 AC006128.1-201ENST00000624704 1661 ntBASIC20.78■□□□□ 0.92
PRAMEP78395 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PRAMEP78395 AC245052.3-201ENST00000450182 901 ntBASIC20.78■□□□□ 0.92
PRAMEP78395 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.78■□□□□ 0.92
PRAMEP78395 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.78■□□□□ 0.92
PRAMEP78395 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.78■□□□□ 0.92
PRAMEP78395 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 AC073130.3-201ENST00000624389 2278 ntBASIC20.78■□□□□ 0.92
PRAMEP78395 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEP78395 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEP78395 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEP78395 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PRAMEP78395 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEP78395 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEP78395 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PRAMEP78395 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEP78395 KRT19P1-201ENST00000405746 1186 ntBASIC20.77■□□□□ 0.92
PRAMEP78395 AC097381.1-201ENST00000429019 1296 ntBASIC20.77■□□□□ 0.92
PRAMEP78395 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.77■□□□□ 0.92
PRAMEP78395 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.77■□□□□ 0.92
PRAMEP78395 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRAMEP78395 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
PRAMEP78395 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.77■□□□□ 0.91
PRAMEP78395 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PRAMEP78395 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEP78395 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEP78395 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.76■□□□□ 0.91
PRAMEP78395 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEP78395 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PRAMEP78395 AC034268.1-201ENST00000441047 882 ntBASIC20.76■□□□□ 0.91
PRAMEP78395 KRT18P20-201ENST00000548986 1279 ntBASIC20.76■□□□□ 0.91
PRAMEP78395 SLC7A5P2-201ENST00000553010 536 ntBASIC20.76■□□□□ 0.91
PRAMEP78395 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEP78395 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEP78395 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PRAMEP78395 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.76■□□□□ 0.91
PRAMEP78395 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEP78395 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.76■□□□□ 0.91
PRAMEP78395 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEP78395 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRAMEP78395 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PRAMEP78395 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEP78395 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PRAMEP78395 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEP78395 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRAMEP78395 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.75■□□□□ 0.91
PRAMEP78395 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.75■□□□□ 0.91
PRAMEP78395 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.75■□□□□ 0.91
PRAMEP78395 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PRAMEP78395 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.75■□□□□ 0.91
PRAMEP78395 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRAMEP78395 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRAMEP78395 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEP78395 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
PRAMEP78395 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.74■□□□□ 0.91
PRAMEP78395 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PRAMEP78395 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PRAMEP78395 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PRAMEP78395 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PRAMEP78395 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PRAMEP78395 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEP78395 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 MIR6821-201ENST00000617625 74 ntBASIC20.74■□□□□ 0.91
PRAMEP78395 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PRAMEP78395 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.74■□□□□ 0.91
PRAMEP78395 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRAMEP78395 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PRAMEP78395 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRAMEP78395 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms