Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.16■■□□□ 1.94
RIPK4P57078 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC27.16■■□□□ 1.94
RIPK4P57078 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RIPK4P57078 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIPK4P57078 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RIPK4P57078 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC27.15■■□□□ 1.94
RIPK4P57078 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.15■■□□□ 1.94
RIPK4P57078 AC007375.3-201ENST00000600936 2314 ntBASIC27.15■■□□□ 1.94
RIPK4P57078 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RIPK4P57078 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
RIPK4P57078 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RIPK4P57078 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RIPK4P57078 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RIPK4P57078 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC27.15■■□□□ 1.94
RIPK4P57078 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RIPK4P57078 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
RIPK4P57078 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC27.14■■□□□ 1.94
RIPK4P57078 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RIPK4P57078 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RIPK4P57078 AC010980.2-201ENST00000587099 1412 ntBASIC27.14■■□□□ 1.93
RIPK4P57078 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RIPK4P57078 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
RIPK4P57078 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RIPK4P57078 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RIPK4P57078 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
RIPK4P57078 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
RIPK4P57078 MKRN4P-201ENST00000444706 1521 ntBASIC27.13■■□□□ 1.93
RIPK4P57078 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.13■■□□□ 1.93
RIPK4P57078 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIPK4P57078 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIPK4P57078 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC27.13■■□□□ 1.93
RIPK4P57078 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.13■■□□□ 1.93
RIPK4P57078 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIPK4P57078 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC27.12■■□□□ 1.93
RIPK4P57078 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIPK4P57078 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIPK4P57078 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
RIPK4P57078 AL138781.1-201ENST00000566567 1274 ntBASIC27.12■■□□□ 1.93
RIPK4P57078 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.12■■□□□ 1.93
RIPK4P57078 SLC29A4P1-201ENST00000398760 971 ntBASIC27.11■■□□□ 1.93
RIPK4P57078 AL355802.2-201ENST00000402069 882 ntBASIC27.11■■□□□ 1.93
RIPK4P57078 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.11■■□□□ 1.93
RIPK4P57078 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RIPK4P57078 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
RIPK4P57078 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RIPK4P57078 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RIPK4P57078 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC27.1■■□□□ 1.93
RIPK4P57078 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RIPK4P57078 AC005229.4-201ENST00000610085 2198 ntBASIC27.1■■□□□ 1.93
RIPK4P57078 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC27.1■■□□□ 1.93
RIPK4P57078 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.1■■□□□ 1.93
RIPK4P57078 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.1■■□□□ 1.93
RIPK4P57078 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.1■■□□□ 1.93
RIPK4P57078 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.1■■□□□ 1.93
RIPK4P57078 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.1■■□□□ 1.93
RIPK4P57078 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RIPK4P57078 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RIPK4P57078 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RIPK4P57078 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC27.1■■□□□ 1.93
RIPK4P57078 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RIPK4P57078 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
RIPK4P57078 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RIPK4P57078 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
RIPK4P57078 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC27.1■■□□□ 1.93
RIPK4P57078 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC27.09■■□□□ 1.93
RIPK4P57078 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RIPK4P57078 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.09■■□□□ 1.93
RIPK4P57078 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.09■■□□□ 1.93
RIPK4P57078 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
RIPK4P57078 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RIPK4P57078 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC27.09■■□□□ 1.93
RIPK4P57078 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
RIPK4P57078 MIPEPP3-201ENST00000412105 444 ntBASIC27.09■■□□□ 1.93
RIPK4P57078 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC27.09■■□□□ 1.93
RIPK4P57078 AC142086.2-201ENST00000569753 217 ntBASIC27.09■■□□□ 1.93
RIPK4P57078 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.09■■□□□ 1.93
RIPK4P57078 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RIPK4P57078 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RIPK4P57078 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RIPK4P57078 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
RIPK4P57078 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RIPK4P57078 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RIPK4P57078 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RIPK4P57078 AL355472.2-201ENST00000422958 438 ntBASIC27.08■■□□□ 1.93
RIPK4P57078 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC27.08■■□□□ 1.93
RIPK4P57078 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.08■■□□□ 1.93
RIPK4P57078 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.08■■□□□ 1.93
RIPK4P57078 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
RIPK4P57078 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.92
RIPK4P57078 AC011484.1-201ENST00000377652 1995 ntBASIC27.08■■□□□ 1.92
RIPK4P57078 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIPK4P57078 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.07■■□□□ 1.92
RIPK4P57078 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC27.07■■□□□ 1.92
RIPK4P57078 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.07■■□□□ 1.92
RIPK4P57078 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RIPK4P57078 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
RIPK4P57078 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RIPK4P57078 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RIPK4P57078 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RIPK4P57078 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms