Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN12P56749 AL162377.1-201ENST00000618844 1793 ntBASIC17.94■□□□□ 0.46
CLDN12P56749 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 AC099778.1-201ENST00000568593 1911 ntBASIC17.94■□□□□ 0.46
CLDN12P56749 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN12P56749 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN12P56749 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN12P56749 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN12P56749 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN12P56749 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN12P56749 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN12P56749 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.93■□□□□ 0.46
CLDN12P56749 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN12P56749 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN12P56749 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN12P56749 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN12P56749 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN12P56749 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN12P56749 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN12P56749 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN12P56749 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN12P56749 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN12P56749 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN12P56749 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN12P56749 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN12P56749 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN12P56749 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN12P56749 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN12P56749 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN12P56749 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN12P56749 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDN12P56749 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN12P56749 SYT6-210ENST00000641643 1587 ntBASIC17.91■□□□□ 0.46
CLDN12P56749 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN12P56749 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN12P56749 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 SMUG1P1-201ENST00000590640 811 ntBASIC17.91■□□□□ 0.46
CLDN12P56749 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN12P56749 AL512631.2-201ENST00000604634 923 ntBASIC17.91■□□□□ 0.46
CLDN12P56749 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN12P56749 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLDN12P56749 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN12P56749 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN12P56749 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN12P56749 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN12P56749 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN12P56749 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN12P56749 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN12P56749 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms