Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 MAK5YBR142W 2322 nt4.33□□□□□ -1.72
UFD2P54860 MTC4YBR255W 2085 nt4.33□□□□□ -1.72
UFD2P54860 KRI1YNL308C 1776 nt4.32□□□□□ -1.72
UFD2P54860 YCR081C-AYCR081C-A 237 nt4.32□□□□□ -1.72
UFD2P54860 YAR029WYAR029W 225 nt4.32□□□□□ -1.72
UFD2P54860 HHT2YNL031C 411 nt4.32□□□□□ -1.72
UFD2P54860 YOR146WYOR146W 306 nt4.32□□□□□ -1.72
UFD2P54860 ATP3YBR039W 936 nt4.32□□□□□ -1.72
UFD2P54860 YOR385WYOR385W 873 nt4.32□□□□□ -1.72
UFD2P54860 PBS2YJL128C 2007 nt4.32□□□□□ -1.72
UFD2P54860 MKT1YNL085W 2493 nt4.32□□□□□ -1.72
UFD2P54860 SSP1YHR184W 1716 nt4.32□□□□□ -1.72
UFD2P54860 PMT6YGR199W 2280 nt4.32□□□□□ -1.72
UFD2P54860 YJR003CYJR003C 1560 nt4.31□□□□□ -1.72
UFD2P54860 NRP1YDL167C 2160 nt4.31□□□□□ -1.72
UFD2P54860 NIC96YFR002W 2520 nt4.31□□□□□ -1.72
UFD2P54860 CBP2YHL038C 1893 nt4.31□□□□□ -1.72
UFD2P54860 RTT105YER104W 627 nt4.31□□□□□ -1.72
UFD2P54860 RPS26BYER131W 360 nt4.31□□□□□ -1.72
UFD2P54860 AAD16YFL057C 459 nt4.31□□□□□ -1.72
UFD2P54860 YGR073CYGR073C 372 nt4.31□□□□□ -1.72
UFD2P54860 SIP18YMR175W 240 nt4.31□□□□□ -1.72
UFD2P54860 snR13snR13 124 nt4.31□□□□□ -1.72
UFD2P54860 VMA1YDL185W 3216 nt4.31□□□□□ -1.72
UFD2P54860 MCM7YBR202W 2538 nt4.31□□□□□ -1.72
UFD2P54860 NUG1YER006W 1563 nt4.31□□□□□ -1.72
UFD2P54860 YJR030CYJR030C 2238 nt4.3□□□□□ -1.72
UFD2P54860 YGR025WYGR025W 303 nt4.3□□□□□ -1.72
UFD2P54860 PEX4YGR133W 552 nt4.3□□□□□ -1.72
UFD2P54860 YKL156C-AYKL156C-A 117 nt4.3□□□□□ -1.72
UFD2P54860 URA10YMR271C 684 nt4.3□□□□□ -1.72
UFD2P54860 IMD4YML056C 1575 nt4.3□□□□□ -1.72
UFD2P54860 YJR112W-AYJR112W-A 330 nt4.29□□□□□ -1.72
UFD2P54860 COX19YLL018C-A 297 nt4.29□□□□□ -1.72
UFD2P54860 YPL080CYPL080C 327 nt4.29□□□□□ -1.72
UFD2P54860 SRB4YER022W 2064 nt4.29□□□□□ -1.72
UFD2P54860 YKL050CYKL050C 2769 nt4.29□□□□□ -1.72
UFD2P54860 VID27YNL212W 2349 nt4.28□□□□□ -1.72
UFD2P54860 EMP70YLR083C 2004 nt4.28□□□□□ -1.72
UFD2P54860 AIM32YML050W 936 nt4.28□□□□□ -1.72
UFD2P54860 PFY1YOR122C 381 nt4.28□□□□□ -1.72
UFD2P54860 YOR225WYOR225W 330 nt4.28□□□□□ -1.72
UFD2P54860 YPL039WYPL039W 951 nt4.28□□□□□ -1.72
UFD2P54860 MED1YPR070W 1701 nt4.28□□□□□ -1.72
UFD2P54860 YKL222CYKL222C 2118 nt4.28□□□□□ -1.72
UFD2P54860 PIM1YBL022C 3402 nt4.28□□□□□ -1.72
UFD2P54860 FAT1YBR041W 2010 nt4.28□□□□□ -1.73
UFD2P54860 DIE2YGR227W 1578 nt4.27□□□□□ -1.73
UFD2P54860 RPB2YOR151C 3675 nt4.27□□□□□ -1.73
UFD2P54860 FRE8YLR047C 2061 nt4.27□□□□□ -1.73
UFD2P54860 YDR102CYDR102C 333 nt4.27□□□□□ -1.73
UFD2P54860 YEL057CYEL057C 702 nt4.27□□□□□ -1.73
UFD2P54860 YHR139C-AYHR139C-A 312 nt4.27□□□□□ -1.73
UFD2P54860 REC104YHR157W 549 nt4.27□□□□□ -1.73
UFD2P54860 YHR214W-AYHR214W-A 486 nt4.27□□□□□ -1.73
UFD2P54860 YAR068WYAR068W 486 nt4.27□□□□□ -1.73
UFD2P54860 LSM2YBL026W 288 nt4.27□□□□□ -1.73
UFD2P54860 LDS2YOL047C 1071 nt4.27□□□□□ -1.73
UFD2P54860 YPR010C-AYPR010C-A 219 nt4.27□□□□□ -1.73
UFD2P54860 YDR089WYDR089W 2610 nt4.27□□□□□ -1.73
UFD2P54860 PDS5YMR076C 3834 nt4.26□□□□□ -1.73
UFD2P54860 RRT13YER066W 558 nt4.26□□□□□ -1.73
UFD2P54860 YGR107WYGR107W 450 nt4.26□□□□□ -1.73
UFD2P54860 NUP133YKR082W 3474 nt4.26□□□□□ -1.73
UFD2P54860 SRO7YPR032W 3102 nt4.26□□□□□ -1.73
UFD2P54860 CWH41YGL027C 2502 nt4.25□□□□□ -1.73
UFD2P54860 ATP5YDR298C 639 nt4.25□□□□□ -1.73
UFD2P54860 DGK1YOR311C 873 nt4.25□□□□□ -1.73
UFD2P54860 MPS1YDL028C 2295 nt4.25□□□□□ -1.73
UFD2P54860 RPO31YOR116C 4383 nt4.25□□□□□ -1.73
UFD2P54860 Q0032Q0032 291 nt4.24□□□□□ -1.73
UFD2P54860 AAD3YCR107W 1092 nt4.24□□□□□ -1.73
UFD2P54860 YFL032WYFL032W 321 nt4.24□□□□□ -1.73
UFD2P54860 YPT53YNL093W 663 nt4.24□□□□□ -1.73
UFD2P54860 TIM18YOR297C 579 nt4.24□□□□□ -1.73
UFD2P54860 BCK2YER167W 2556 nt4.24□□□□□ -1.73
UFD2P54860 YHR063W-AYHR063W-A 336 nt4.23□□□□□ -1.73
UFD2P54860 AIM26YKL037W 357 nt4.23□□□□□ -1.73
UFD2P54860 RPL15AYLR029C 615 nt4.23□□□□□ -1.73
UFD2P54860 JIP3YLR331C 378 nt4.23□□□□□ -1.73
UFD2P54860 RPL19BYBL027W 570 nt4.23□□□□□ -1.73
UFD2P54860 TVP18YMR071C 504 nt4.23□□□□□ -1.73
UFD2P54860 YMR290W-AYMR290W-A 348 nt4.23□□□□□ -1.73
UFD2P54860 YBL108WYBL108W 306 nt4.23□□□□□ -1.73
UFD2P54860 YPL276WYPL276W 438 nt4.23□□□□□ -1.73
UFD2P54860 CDC45YLR103C 1953 nt4.23□□□□□ -1.73
UFD2P54860 SMT3YDR510W 306 nt4.22□□□□□ -1.73
UFD2P54860 RPL29YFR032C-A 180 nt4.22□□□□□ -1.73
UFD2P54860 PET191YJR034W 327 nt4.22□□□□□ -1.73
UFD2P54860 YMR320WYMR320W 306 nt4.22□□□□□ -1.73
UFD2P54860 FUN12YAL035W 3009 nt4.22□□□□□ -1.73
UFD2P54860 RDS1YCR106W 2499 nt4.21□□□□□ -1.73
UFD2P54860 GPI8YDR331W 1236 nt4.21□□□□□ -1.74
UFD2P54860 ATP17YDR377W 306 nt4.21□□□□□ -1.74
UFD2P54860 YIL012WYIL012W 342 nt4.21□□□□□ -1.74
UFD2P54860 BIL1YOR304C-A 231 nt4.21□□□□□ -1.74
UFD2P54860 RED1YLR263W 2484 nt4.21□□□□□ -1.74
UFD2P54860 YLR001CYLR001C 2589 nt4.21□□□□□ -1.74
UFD2P54860 CAF130YGR134W 3369 nt4.2□□□□□ -1.74
UFD2P54860 HMG1YML075C 3165 nt4.2□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms