Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLCNKAP51800 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLCNKAP51800 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLCNKAP51800 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCNKAP51800 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.3■□□□□ 0.84
CLCNKAP51800 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLCNKAP51800 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCNKAP51800 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCNKAP51800 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCNKAP51800 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCNKAP51800 AL355802.2-201ENST00000402069 882 ntBASIC20.3■□□□□ 0.84
CLCNKAP51800 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCNKAP51800 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.3■□□□□ 0.84
CLCNKAP51800 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.3■□□□□ 0.84
CLCNKAP51800 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCNKAP51800 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLCNKAP51800 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLCNKAP51800 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCNKAP51800 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCNKAP51800 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLCNKAP51800 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.29■□□□□ 0.84
CLCNKAP51800 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCNKAP51800 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLCNKAP51800 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCNKAP51800 MKRN4P-201ENST00000444706 1521 ntBASIC20.29■□□□□ 0.84
CLCNKAP51800 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCNKAP51800 AC093787.1-201ENST00000450396 207 ntBASIC20.29■□□□□ 0.84
CLCNKAP51800 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.29■□□□□ 0.84
CLCNKAP51800 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCNKAP51800 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.29■□□□□ 0.84
CLCNKAP51800 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCNKAP51800 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLCNKAP51800 AC007322.3-201ENST00000426526 701 ntBASIC20.28■□□□□ 0.84
CLCNKAP51800 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCNKAP51800 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCNKAP51800 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CLCNKAP51800 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLCNKAP51800 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCNKAP51800 AC010980.2-201ENST00000587099 1412 ntBASIC20.27■□□□□ 0.84
CLCNKAP51800 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCNKAP51800 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLCNKAP51800 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 AL024507.2-201ENST00000606070 2574 ntBASIC20.27■□□□□ 0.84
CLCNKAP51800 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CLCNKAP51800 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CLCNKAP51800 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKAP51800 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CLCNKAP51800 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.27■□□□□ 0.83
CLCNKAP51800 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLCNKAP51800 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKAP51800 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCNKAP51800 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKAP51800 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCNKAP51800 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCNKAP51800 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCNKAP51800 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKAP51800 MIPEPP3-201ENST00000412105 444 ntBASIC20.26■□□□□ 0.83
CLCNKAP51800 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCNKAP51800 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCNKAP51800 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKAP51800 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCNKAP51800 MIR4758-201ENST00000577688 71 ntBASIC20.26■□□□□ 0.83
CLCNKAP51800 AC133041.1-202ENST00000642053 222 ntBASIC20.26■□□□□ 0.83
CLCNKAP51800 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCNKAP51800 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKAP51800 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCNKAP51800 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKAP51800 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCNKAP51800 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.25■□□□□ 0.83
CLCNKAP51800 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.25■□□□□ 0.83
CLCNKAP51800 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCNKAP51800 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.25■□□□□ 0.83
CLCNKAP51800 AL138781.1-201ENST00000566567 1274 ntBASIC20.25■□□□□ 0.83
CLCNKAP51800 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCNKAP51800 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 AC116050.2-201ENST00000612102 1779 ntBASIC20.25■□□□□ 0.83
CLCNKAP51800 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLCNKAP51800 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCNKAP51800 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms