Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.27■□□□□ 0.52
SRP9P49458 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP9P49458 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.27■□□□□ 0.52
SRP9P49458 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRP9P49458 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRP9P49458 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.27■□□□□ 0.51
SRP9P49458 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.27■□□□□ 0.51
SRP9P49458 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.27■□□□□ 0.51
SRP9P49458 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRP9P49458 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SRP9P49458 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.26■□□□□ 0.51
SRP9P49458 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.26■□□□□ 0.51
SRP9P49458 GABARAPL3-202ENST00000624044 1851 ntBASIC18.26■□□□□ 0.51
SRP9P49458 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SRP9P49458 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 AC009237.3-201ENST00000393279 1427 ntBASIC18.26■□□□□ 0.51
SRP9P49458 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SRP9P49458 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 AC027612.3-201ENST00000413684 1047 ntBASIC18.26■□□□□ 0.51
SRP9P49458 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.26■□□□□ 0.51
SRP9P49458 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SRP9P49458 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.26■□□□□ 0.51
SRP9P49458 MIR6084-201ENST00000622012 110 ntBASIC18.26■□□□□ 0.51
SRP9P49458 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SRP9P49458 AC073314.1-201ENST00000568729 2216 ntBASIC18.26■□□□□ 0.51
SRP9P49458 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRP9P49458 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.26■□□□□ 0.51
SRP9P49458 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.25■□□□□ 0.51
SRP9P49458 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
SRP9P49458 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.25■□□□□ 0.51
SRP9P49458 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP9P49458 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.25■□□□□ 0.51
SRP9P49458 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
SRP9P49458 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.25■□□□□ 0.51
SRP9P49458 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP9P49458 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP9P49458 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP9P49458 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRP9P49458 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRP9P49458 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRP9P49458 AC104564.3-201ENST00000582367 638 ntBASIC18.25■□□□□ 0.51
SRP9P49458 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SRP9P49458 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.25■□□□□ 0.51
SRP9P49458 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SRP9P49458 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
SRP9P49458 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.25■□□□□ 0.51
SRP9P49458 AL049796.1-201ENST00000565336 1766 ntBASIC18.25■□□□□ 0.51
SRP9P49458 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 AP005212.1-201ENST00000581547 1997 ntBASIC18.24■□□□□ 0.51
SRP9P49458 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SRP9P49458 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRP9P49458 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SRP9P49458 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.24■□□□□ 0.51
SRP9P49458 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.24■□□□□ 0.51
SRP9P49458 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.24■□□□□ 0.51
SRP9P49458 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SRP9P49458 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.23■□□□□ 0.51
SRP9P49458 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
SRP9P49458 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SRP9P49458 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.23■□□□□ 0.51
SRP9P49458 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.23■□□□□ 0.51
SRP9P49458 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.23■□□□□ 0.51
SRP9P49458 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.23■□□□□ 0.51
SRP9P49458 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRP9P49458 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.22■□□□□ 0.51
SRP9P49458 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.22■□□□□ 0.51
SRP9P49458 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SRP9P49458 AL020996.1-203ENST00000536896 2307 ntBASIC18.22■□□□□ 0.51
SRP9P49458 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SRP9P49458 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRP9P49458 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRP9P49458 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms