Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC6A12P48065 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A12P48065 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.99■□□□□ 0.79
SLC6A12P48065 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A12P48065 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC6A12P48065 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC6A12P48065 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC6A12P48065 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A12P48065 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLC6A12P48065 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A12P48065 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A12P48065 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A12P48065 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A12P48065 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A12P48065 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC6A12P48065 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A12P48065 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A12P48065 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLC6A12P48065 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A12P48065 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLC6A12P48065 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLC6A12P48065 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A12P48065 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC6A12P48065 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC6A12P48065 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SLC6A12P48065 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SLC6A12P48065 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC6A12P48065 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC6A12P48065 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
SLC6A12P48065 AC027702.1-201ENST00000563810 1770 ntBASIC19.98■□□□□ 0.79
SLC6A12P48065 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 AP005212.1-201ENST00000581547 1997 ntBASIC19.97■□□□□ 0.79
SLC6A12P48065 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC6A12P48065 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC6A12P48065 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC6A12P48065 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC6A12P48065 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC6A12P48065 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLC6A12P48065 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC6A12P48065 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC6A12P48065 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC6A12P48065 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A12P48065 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC6A12P48065 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A12P48065 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC6A12P48065 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A12P48065 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A12P48065 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.96■□□□□ 0.79
SLC6A12P48065 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SLC6A12P48065 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.96■□□□□ 0.79
SLC6A12P48065 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A12P48065 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC6A12P48065 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A12P48065 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A12P48065 AC073314.1-201ENST00000568729 2216 ntBASIC19.96■□□□□ 0.79
SLC6A12P48065 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A12P48065 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A12P48065 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC6A12P48065 LINC01521-201ENST00000504184 1943 ntBASIC19.96■□□□□ 0.79
SLC6A12P48065 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC6A12P48065 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC6A12P48065 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC6A12P48065 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A12P48065 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC6A12P48065 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC6A12P48065 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SLC6A12P48065 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.95■□□□□ 0.78
SLC6A12P48065 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 LINC01006-201ENST00000333319 2292 ntBASIC19.95■□□□□ 0.78
SLC6A12P48065 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC6A12P48065 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC6A12P48065 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 FP700111.2-201ENST00000619190 1892 ntBASIC19.94■□□□□ 0.78
SLC6A12P48065 GABARAPL3-202ENST00000624044 1851 ntBASIC19.94■□□□□ 0.78
SLC6A12P48065 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC6A12P48065 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC6A12P48065 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
SLC6A12P48065 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A12P48065 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SLC6A12P48065 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms