Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 XRN1YGL173C 4587 nt2.83□□□□□ -1.96
RPH1P39956 RIM13YMR154C 2184 nt2.83□□□□□ -1.96
RPH1P39956 PMR1YGL167C 2853 nt2.82□□□□□ -1.96
RPH1P39956 PFF1YBR074W 2931 nt2.82□□□□□ -1.96
RPH1P39956 HRD1YOL013C 1656 nt2.82□□□□□ -1.96
RPH1P39956 STI1YOR027W 1770 nt2.82□□□□□ -1.96
RPH1P39956 SRP68YPL243W 1800 nt2.82□□□□□ -1.96
RPH1P39956 CHS3YBR023C 3498 nt2.82□□□□□ -1.96
RPH1P39956 snR59snR59 78 nt2.82□□□□□ -1.96
RPH1P39956 SPT2YER161C 1002 nt2.82□□□□□ -1.96
RPH1P39956 SMX2YFL017W-A 234 nt2.82□□□□□ -1.96
RPH1P39956 RNH203YLR154C 333 nt2.82□□□□□ -1.96
RPH1P39956 YLR224WYLR224W 1110 nt2.82□□□□□ -1.96
RPH1P39956 YLR297WYLR297W 390 nt2.82□□□□□ -1.96
RPH1P39956 PDP3YLR455W 915 nt2.82□□□□□ -1.96
RPH1P39956 CSI2YOL007C 1026 nt2.82□□□□□ -1.96
RPH1P39956 YOL114CYOL114C 609 nt2.82□□□□□ -1.96
RPH1P39956 PRM3YPL192C 402 nt2.82□□□□□ -1.96
RPH1P39956 DUF1YOL087C 3351 nt2.82□□□□□ -1.96
RPH1P39956 GDS1YOR355W 1569 nt2.82□□□□□ -1.96
RPH1P39956 TMA64YDR117C 1698 nt2.82□□□□□ -1.96
RPH1P39956 JSN1YJR091C 3276 nt2.81□□□□□ -1.96
RPH1P39956 VIP1YLR410W 3441 nt2.81□□□□□ -1.96
RPH1P39956 YDR118W-AYDR118W-A 117 nt2.81□□□□□ -1.96
RPH1P39956 VPS74YDR372C 1038 nt2.81□□□□□ -1.96
RPH1P39956 YFR054CYFR054C 579 nt2.81□□□□□ -1.96
RPH1P39956 ERP6YGL002W 651 nt2.81□□□□□ -1.96
RPH1P39956 RPL9AYGL147C 576 nt2.81□□□□□ -1.96
RPH1P39956 YIR020CYIR020C 303 nt2.81□□□□□ -1.96
RPH1P39956 VPS51YKR020W 495 nt2.81□□□□□ -1.96
RPH1P39956 SEN15YMR059W 387 nt2.81□□□□□ -1.96
RPH1P39956 YMR173W-AYMR173W-A 1185 nt2.81□□□□□ -1.96
RPH1P39956 AVT5YBL089W 1380 nt2.81□□□□□ -1.96
RPH1P39956 SWC4YGR002C 1431 nt2.81□□□□□ -1.96
RPH1P39956 MUB1YMR100W 1863 nt2.81□□□□□ -1.96
RPH1P39956 FRE2YKL220C 2136 nt2.81□□□□□ -1.96
RPH1P39956 DNA2YHR164C 4569 nt2.81□□□□□ -1.96
RPH1P39956 SHE4YOR035C 2370 nt2.8□□□□□ -1.96
RPH1P39956 PBS2YJL128C 2007 nt2.8□□□□□ -1.96
RPH1P39956 PUF6YDR496C 1971 nt2.8□□□□□ -1.96
RPH1P39956 UBP16YPL072W 1500 nt2.8□□□□□ -1.96
RPH1P39956 SNA4YDL123W 423 nt2.8□□□□□ -1.96
RPH1P39956 COX13YGL191W 390 nt2.8□□□□□ -1.96
RPH1P39956 YGR039WYGR039W 312 nt2.8□□□□□ -1.96
RPH1P39956 YIR036W-AYIR036W-A 402 nt2.8□□□□□ -1.96
RPH1P39956 YHC1YLR298C 696 nt2.8□□□□□ -1.96
RPH1P39956 TOM22YNL131W 459 nt2.8□□□□□ -1.96
RPH1P39956 YOR331CYOR331C 558 nt2.8□□□□□ -1.96
RPH1P39956 YPR053CYPR053C 456 nt2.8□□□□□ -1.96
RPH1P39956 MSH2YOL090W 2895 nt2.8□□□□□ -1.96
RPH1P39956 SAP1YER047C 2694 nt2.8□□□□□ -1.96
RPH1P39956 YJL132WYJL132W 2253 nt2.8□□□□□ -1.96
RPH1P39956 TOM70YNL121C 1854 nt2.79□□□□□ -1.96
RPH1P39956 TAF2YCR042C 4224 nt2.79□□□□□ -1.96
RPH1P39956 CBS1YDL069C 690 nt2.79□□□□□ -1.96
RPH1P39956 YDR157WYDR157W 402 nt2.79□□□□□ -1.96
RPH1P39956 GIM4YEL003W 336 nt2.79□□□□□ -1.96
RPH1P39956 YER084W-AYER084W-A 513 nt2.79□□□□□ -1.96
RPH1P39956 YKL156C-AYKL156C-A 117 nt2.79□□□□□ -1.96
RPH1P39956 ENV10YLR065C 546 nt2.79□□□□□ -1.96
RPH1P39956 YLR076CYLR076C 423 nt2.79□□□□□ -1.96
RPH1P39956 YLR334CYLR334C 381 nt2.79□□□□□ -1.96
RPH1P39956 PRE8YML092C 753 nt2.79□□□□□ -1.96
RPH1P39956 GPI15YNL038W 690 nt2.79□□□□□ -1.96
RPH1P39956 YPR170W-AYPR170W-A 186 nt2.79□□□□□ -1.96
RPH1P39956 YBR259WYBR259W 2067 nt2.79□□□□□ -1.96
RPH1P39956 DAL5YJR152W 1632 nt2.79□□□□□ -1.96
RPH1P39956 RSN1YMR266W 2862 nt2.79□□□□□ -1.96
RPH1P39956 SPO23YBR250W 1572 nt2.78□□□□□ -1.96
RPH1P39956 YAT2YER024W 2772 nt2.78□□□□□ -1.96
RPH1P39956 ADY4YLR227C 1482 nt2.78□□□□□ -1.96
RPH1P39956 VPS3YDR495C 3036 nt2.78□□□□□ -1.96
RPH1P39956 CIN1YOR349W 3045 nt2.78□□□□□ -1.96
RPH1P39956 PEX5YDR244W 1839 nt2.78□□□□□ -1.96
RPH1P39956 YDR537CYDR537C 606 nt2.78□□□□□ -1.96
RPH1P39956 YGR073CYGR073C 372 nt2.78□□□□□ -1.96
RPH1P39956 YJL086CYJL086C 369 nt2.78□□□□□ -1.96
RPH1P39956 YKR033CYKR033C 426 nt2.78□□□□□ -1.96
RPH1P39956 YLR154W-FYLR154W-F 141 nt2.78□□□□□ -1.96
RPH1P39956 YOR277CYOR277C 309 nt2.78□□□□□ -1.96
RPH1P39956 LCL1YPL056C 306 nt2.78□□□□□ -1.96
RPH1P39956 YBR062CYBR062C 543 nt2.78□□□□□ -1.96
RPH1P39956 YPR012WYPR012W 255 nt2.78□□□□□ -1.96
RPH1P39956 RRG8YPR116W 834 nt2.78□□□□□ -1.96
RPH1P39956 YPR203WYPR203W 309 nt2.78□□□□□ -1.96
RPH1P39956 FRE8YLR047C 2061 nt2.78□□□□□ -1.96
RPH1P39956 UTP15YMR093W 1542 nt2.78□□□□□ -1.97
RPH1P39956 DYN1YKR054C 12279 nt2.77□□□□□ -1.97
RPH1P39956 CEP3YMR168C 1827 nt2.77□□□□□ -1.97
RPH1P39956 GYP7YDL234C 2241 nt2.77□□□□□ -1.97
RPH1P39956 CAF120YNL278W 3183 nt2.77□□□□□ -1.97
RPH1P39956 SCY1YGL083W 2415 nt2.77□□□□□ -1.97
RPH1P39956 YDR114CYDR114C 303 nt2.77□□□□□ -1.97
RPH1P39956 SMT3YDR510W 306 nt2.77□□□□□ -1.97
RPH1P39956 AST2YER101C 1293 nt2.77□□□□□ -1.97
RPH1P39956 YHR130CYHR130C 336 nt2.77□□□□□ -1.97
RPH1P39956 AFB1YLR040C 675 nt2.77□□□□□ -1.97
RPH1P39956 YLR171WYLR171W 390 nt2.77□□□□□ -1.97
RPH1P39956 ARC18YLR370C 537 nt2.77□□□□□ -1.97
RPH1P39956 PBI2YNL015W 228 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 133.1 ms