Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 PUT3YKL015W 2940 nt2.4□□□□□ -2.03
MRPL40P36534 GPI19YDR437W 423 nt2.39□□□□□ -2.03
MRPL40P36534 TWF1YGR080W 999 nt2.39□□□□□ -2.03
MRPL40P36534 COG2YGR120C 789 nt2.39□□□□□ -2.03
MRPL40P36534 YKL115CYKL115C 393 nt2.39□□□□□ -2.03
MRPL40P36534 ATG10YLL042C 504 nt2.39□□□□□ -2.03
MRPL40P36534 YMR320WYMR320W 306 nt2.39□□□□□ -2.03
MRPL40P36534 ATX1YNL259C 222 nt2.39□□□□□ -2.03
MRPL40P36534 HSC82YMR186W 2118 nt2.39□□□□□ -2.03
MRPL40P36534 ALY1YKR021W 2748 nt2.39□□□□□ -2.03
MRPL40P36534 MSB1YOR188W 3414 nt2.39□□□□□ -2.03
MRPL40P36534 SCD5YOR329C 2619 nt2.38□□□□□ -2.03
MRPL40P36534 GIC2YDR309C 1152 nt2.38□□□□□ -2.03
MRPL40P36534 SLD5YDR489W 885 nt2.38□□□□□ -2.03
MRPL40P36534 TIM9YEL020W-A 264 nt2.38□□□□□ -2.03
MRPL40P36534 LSM12YHR121W 564 nt2.38□□□□□ -2.03
MRPL40P36534 RRT16YNL105W 429 nt2.38□□□□□ -2.03
MRPL40P36534 YNR034W-AYNR034W-A 297 nt2.38□□□□□ -2.03
MRPL40P36534 CSI2YOL007C 1026 nt2.38□□□□□ -2.03
MRPL40P36534 SIP3YNL257C 3690 nt2.38□□□□□ -2.03
MRPL40P36534 YPR097WYPR097W 3222 nt2.38□□□□□ -2.03
MRPL40P36534 NUP100YKL068W 2880 nt2.37□□□□□ -2.03
MRPL40P36534 ART10YLR392C 1557 nt2.37□□□□□ -2.03
MRPL40P36534 YCR064CYCR064C 411 nt2.37□□□□□ -2.03
MRPL40P36534 YDR381C-AYDR381C-A 345 nt2.37□□□□□ -2.03
MRPL40P36534 YER119C-AYER119C-A 372 nt2.37□□□□□ -2.03
MRPL40P36534 UTP30YKR060W 825 nt2.37□□□□□ -2.03
MRPL40P36534 SRP1YNL189W 1629 nt2.37□□□□□ -2.03
MRPL40P36534 SLK19YOR195W 2466 nt2.36□□□□□ -2.03
MRPL40P36534 BFR1YOR198C 1413 nt2.36□□□□□ -2.03
MRPL40P36534 SWR1YDR334W 4545 nt2.36□□□□□ -2.03
MRPL40P36534 ADK1YDR226W 669 nt2.36□□□□□ -2.03
MRPL40P36534 YAL026C-AYAL026C-A 438 nt2.36□□□□□ -2.03
MRPL40P36534 PEX17YNL214W 600 nt2.36□□□□□ -2.03
MRPL40P36534 YCR016WYCR016W 873 nt2.35□□□□□ -2.03
MRPL40P36534 YEA4YEL004W 1029 nt2.35□□□□□ -2.03
MRPL40P36534 CKA1YIL035C 1119 nt2.35□□□□□ -2.03
MRPL40P36534 ICY1YMR195W 384 nt2.35□□□□□ -2.03
MRPL40P36534 UBP16YPL072W 1500 nt2.35□□□□□ -2.03
MRPL40P36534 YJL181WYJL181W 1836 nt2.35□□□□□ -2.03
MRPL40P36534 GPI17YDR434W 1605 nt2.35□□□□□ -2.03
MRPL40P36534 YOL098CYOL098C 3114 nt2.35□□□□□ -2.03
MRPL40P36534 BAS1YKR099W 2436 nt2.34□□□□□ -2.03
MRPL40P36534 INP53YOR109W 3324 nt2.34□□□□□ -2.03
MRPL40P36534 UBC13YDR092W 462 nt2.34□□□□□ -2.03
MRPL40P36534 RUB1YDR139C 234 nt2.34□□□□□ -2.03
MRPL40P36534 CBS2YDR197W 1170 nt2.34□□□□□ -2.03
MRPL40P36534 AAD16YFL057C 459 nt2.34□□□□□ -2.03
MRPL40P36534 MST27YGL051W 705 nt2.34□□□□□ -2.03
MRPL40P36534 RPL11BYGR085C 525 nt2.34□□□□□ -2.03
MRPL40P36534 PEX4YGR133W 552 nt2.34□□□□□ -2.03
MRPL40P36534 PAU8YAL068C 363 nt2.34□□□□□ -2.03
MRPL40P36534 MST28YAR033W 705 nt2.34□□□□□ -2.03
MRPL40P36534 ECI1YLR284C 843 nt2.34□□□□□ -2.03
MRPL40P36534 GRE2YOL151W 1029 nt2.34□□□□□ -2.03
MRPL40P36534 PAU20YOL161C 363 nt2.34□□□□□ -2.03
MRPL40P36534 RPL11AYPR102C 525 nt2.34□□□□□ -2.03
MRPL40P36534 RGA1YOR127W 3024 nt2.34□□□□□ -2.03
MRPL40P36534 ESC2YDR363W 1371 nt2.34□□□□□ -2.04
MRPL40P36534 SSP1YHR184W 1716 nt2.34□□□□□ -2.04
MRPL40P36534 CST9YLR394W 1449 nt2.34□□□□□ -2.04
MRPL40P36534 PSK2YOL045W 3306 nt2.34□□□□□ -2.04
MRPL40P36534 YDR338CYDR338C 2088 nt2.33□□□□□ -2.04
MRPL40P36534 STH1YIL126W 4080 nt2.33□□□□□ -2.04
MRPL40P36534 AFI1YOR129C 2682 nt2.33□□□□□ -2.04
MRPL40P36534 YER091C-AYER091C-A 222 nt2.33□□□□□ -2.04
MRPL40P36534 GLC7YER133W 939 nt2.33□□□□□ -2.04
MRPL40P36534 SVP26YHR181W 687 nt2.33□□□□□ -2.04
MRPL40P36534 YPT52YKR014C 705 nt2.33□□□□□ -2.04
MRPL40P36534 YLR154W-EYLR154W-E 204 nt2.33□□□□□ -2.04
MRPL40P36534 YOL162WYOL162W 648 nt2.33□□□□□ -2.04
MRPL40P36534 RFC5YBR087W 1065 nt2.33□□□□□ -2.04
MRPL40P36534 SEC66YBR171W 621 nt2.33□□□□□ -2.04
MRPL40P36534 CBF2YGR140W 2871 nt2.32□□□□□ -2.04
MRPL40P36534 MCD1YDL003W 1701 nt2.32□□□□□ -2.04
MRPL40P36534 SNA4YDL123W 423 nt2.32□□□□□ -2.04
MRPL40P36534 SDC1YDR469W 528 nt2.32□□□□□ -2.04
MRPL40P36534 CAJ1YER048C 1176 nt2.32□□□□□ -2.04
MRPL40P36534 RPL22BYFL034C-A 369 nt2.32□□□□□ -2.04
MRPL40P36534 MPC1YGL080W 393 nt2.32□□□□□ -2.04
MRPL40P36534 ACB1YGR037C 264 nt2.32□□□□□ -2.04
MRPL40P36534 YMR306C-AYMR306C-A 390 nt2.32□□□□□ -2.04
MRPL40P36534 YOR097CYOR097C 528 nt2.32□□□□□ -2.04
MRPL40P36534 PET20YPL159C 762 nt2.32□□□□□ -2.04
MRPL40P36534 YEL043WYEL043W 2871 nt2.32□□□□□ -2.04
MRPL40P36534 INO80YGL150C 4470 nt2.32□□□□□ -2.04
MRPL40P36534 NPR1YNL183C 2373 nt2.32□□□□□ -2.04
MRPL40P36534 UBX3YDL091C 1368 nt2.32□□□□□ -2.04
MRPL40P36534 YIL166CYIL166C 1629 nt2.31□□□□□ -2.04
MRPL40P36534 KAP123YER110C 3342 nt2.31□□□□□ -2.04
MRPL40P36534 YHL002C-AYHL002C-A 489 nt2.31□□□□□ -2.04
MRPL40P36534 CTK2YJL006C 972 nt2.31□□□□□ -2.04
MRPL40P36534 YLR154W-AYLR154W-A 186 nt2.31□□□□□ -2.04
MRPL40P36534 NEJ1YLR265C 1029 nt2.31□□□□□ -2.04
MRPL40P36534 MBA1YBR185C 837 nt2.31□□□□□ -2.04
MRPL40P36534 YBR209WYBR209W 318 nt2.31□□□□□ -2.04
MRPL40P36534 KSP1YHR082C 3090 nt2.31□□□□□ -2.04
MRPL40P36534 SAP190YKR028W 3102 nt2.31□□□□□ -2.04
MRPL40P36534 TRZ1YKR079C 2517 nt2.3□□□□□ -2.04
MRPL40P36534 ATC1YDR184C 885 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms