Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX6P35712 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX6P35712 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SOX6P35712 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
SOX6P35712 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX6P35712 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SOX6P35712 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.5■□□□□ 0.55
SOX6P35712 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SOX6P35712 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SOX6P35712 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.5■□□□□ 0.55
SOX6P35712 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX6P35712 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.49■□□□□ 0.55
SOX6P35712 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.49■□□□□ 0.55
SOX6P35712 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SOX6P35712 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX6P35712 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
SOX6P35712 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX6P35712 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX6P35712 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SOX6P35712 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX6P35712 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX6P35712 AC007225.1-201ENST00000566331 1836 ntBASIC18.48■□□□□ 0.55
SOX6P35712 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SOX6P35712 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SOX6P35712 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SOX6P35712 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SOX6P35712 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 AC116562.4-201ENST00000641316 2276 ntBASIC18.47■□□□□ 0.55
SOX6P35712 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.47■□□□□ 0.55
SOX6P35712 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SOX6P35712 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.47■□□□□ 0.55
SOX6P35712 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.47■□□□□ 0.55
SOX6P35712 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 AL162377.1-201ENST00000618844 1793 ntBASIC18.47■□□□□ 0.55
SOX6P35712 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SOX6P35712 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SOX6P35712 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX6P35712 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX6P35712 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.46■□□□□ 0.55
SOX6P35712 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SOX6P35712 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SOX6P35712 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX6P35712 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.46■□□□□ 0.55
SOX6P35712 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SOX6P35712 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.46■□□□□ 0.55
SOX6P35712 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SOX6P35712 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SOX6P35712 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SOX6P35712 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms