Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.87■□□□□ 0.93
RPA3P35244 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RPA3P35244 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.86■□□□□ 0.93
RPA3P35244 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RPA3P35244 AC020907.5-201ENST00000624372 1936 ntBASIC20.86■□□□□ 0.93
RPA3P35244 AC112907.3-201ENST00000577781 2400 ntBASIC20.86■□□□□ 0.93
RPA3P35244 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPA3P35244 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPA3P35244 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.86■□□□□ 0.93
RPA3P35244 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
RPA3P35244 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPA3P35244 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPA3P35244 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.86■□□□□ 0.93
RPA3P35244 AC012414.1-201ENST00000556676 535 ntBASIC20.86■□□□□ 0.93
RPA3P35244 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.86■□□□□ 0.93
RPA3P35244 AL358852.1-201ENST00000623174 1268 ntBASIC20.86■□□□□ 0.93
RPA3P35244 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPA3P35244 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.86■□□□□ 0.93
RPA3P35244 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPA3P35244 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPA3P35244 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.85■□□□□ 0.93
RPA3P35244 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RPA3P35244 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPA3P35244 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.85■□□□□ 0.93
RPA3P35244 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.85■□□□□ 0.93
RPA3P35244 AL354811.1-201ENST00000610286 706 ntBASIC20.85■□□□□ 0.93
RPA3P35244 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPA3P35244 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RPA3P35244 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPA3P35244 AC007225.1-201ENST00000566331 1836 ntBASIC20.85■□□□□ 0.93
RPA3P35244 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPA3P35244 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RPA3P35244 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPA3P35244 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPA3P35244 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.84■□□□□ 0.93
RPA3P35244 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.84■□□□□ 0.93
RPA3P35244 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPA3P35244 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPA3P35244 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPA3P35244 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.84■□□□□ 0.93
RPA3P35244 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RPA3P35244 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.83■□□□□ 0.93
RPA3P35244 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RPA3P35244 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.83■□□□□ 0.93
RPA3P35244 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPA3P35244 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RPA3P35244 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPA3P35244 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.83■□□□□ 0.93
RPA3P35244 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPA3P35244 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.83■□□□□ 0.93
RPA3P35244 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.83■□□□□ 0.93
RPA3P35244 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.83■□□□□ 0.93
RPA3P35244 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RPA3P35244 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RPA3P35244 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RPA3P35244 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPA3P35244 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPA3P35244 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPA3P35244 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPA3P35244 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPA3P35244 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.82■□□□□ 0.92
RPA3P35244 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RPA3P35244 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.82■□□□□ 0.92
RPA3P35244 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RPA3P35244 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPA3P35244 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.82■□□□□ 0.92
RPA3P35244 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.82■□□□□ 0.92
RPA3P35244 MIR6084-201ENST00000622012 110 ntBASIC20.82■□□□□ 0.92
RPA3P35244 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RPA3P35244 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RPA3P35244 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPA3P35244 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.82■□□□□ 0.92
RPA3P35244 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPA3P35244 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPA3P35244 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.81■□□□□ 0.92
RPA3P35244 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.81■□□□□ 0.92
RPA3P35244 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.81■□□□□ 0.92
RPA3P35244 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPA3P35244 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RPA3P35244 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.81■□□□□ 0.92
RPA3P35244 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPA3P35244 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms