Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
PTX3P26022 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PTX3P26022 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
PTX3P26022 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.8■□□□□ 0.76
PTX3P26022 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 LINC01521-201ENST00000504184 1943 ntBASIC19.8■□□□□ 0.76
PTX3P26022 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PTX3P26022 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTX3P26022 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.79■□□□□ 0.76
PTX3P26022 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.79■□□□□ 0.76
PTX3P26022 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PTX3P26022 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PTX3P26022 AC026271.2-201ENST00000428091 497 ntBASIC19.79■□□□□ 0.76
PTX3P26022 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.79■□□□□ 0.76
PTX3P26022 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.79■□□□□ 0.76
PTX3P26022 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PTX3P26022 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.79■□□□□ 0.76
PTX3P26022 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.79■□□□□ 0.76
PTX3P26022 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTX3P26022 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.78■□□□□ 0.76
PTX3P26022 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.78■□□□□ 0.76
PTX3P26022 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.78■□□□□ 0.76
PTX3P26022 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.78■□□□□ 0.76
PTX3P26022 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.78■□□□□ 0.76
PTX3P26022 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
PTX3P26022 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.78■□□□□ 0.76
PTX3P26022 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.78■□□□□ 0.76
PTX3P26022 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.78■□□□□ 0.76
PTX3P26022 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PTX3P26022 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTX3P26022 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.77■□□□□ 0.76
PTX3P26022 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTX3P26022 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTX3P26022 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTX3P26022 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTX3P26022 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTX3P26022 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
PTX3P26022 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.77■□□□□ 0.76
PTX3P26022 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PTX3P26022 RARRES2P6-201ENST00000567333 442 ntBASIC19.77■□□□□ 0.76
PTX3P26022 AC243732.1-201ENST00000612648 864 ntBASIC19.77■□□□□ 0.76
PTX3P26022 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.77■□□□□ 0.76
PTX3P26022 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PTX3P26022 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PTX3P26022 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
PTX3P26022 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.77■□□□□ 0.75
PTX3P26022 AC073130.3-201ENST00000624389 2278 ntBASIC19.77■□□□□ 0.75
PTX3P26022 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.76■□□□□ 0.75
PTX3P26022 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTX3P26022 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTX3P26022 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTX3P26022 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PTX3P26022 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.76■□□□□ 0.75
PTX3P26022 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTX3P26022 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTX3P26022 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTX3P26022 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.76■□□□□ 0.75
PTX3P26022 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTX3P26022 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTX3P26022 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.76■□□□□ 0.75
PTX3P26022 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTX3P26022 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms