Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 C2orf69P4-201ENST00000565394 541 ntBASIC20.4■□□□□ 0.86
LAMA1P25391 AC243732.1-201ENST00000612648 864 ntBASIC20.4■□□□□ 0.86
LAMA1P25391 AC080038.3-201ENST00000623346 1952 ntBASIC20.4■□□□□ 0.86
LAMA1P25391 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LAMA1P25391 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.4■□□□□ 0.86
LAMA1P25391 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LAMA1P25391 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LAMA1P25391 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
LAMA1P25391 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.4■□□□□ 0.86
LAMA1P25391 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LAMA1P25391 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LAMA1P25391 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LAMA1P25391 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LAMA1P25391 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LAMA1P25391 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LAMA1P25391 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LAMA1P25391 AC068473.5-201ENST00000616428 2072 ntBASIC20.39■□□□□ 0.86
LAMA1P25391 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LAMA1P25391 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LAMA1P25391 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.39■□□□□ 0.86
LAMA1P25391 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LAMA1P25391 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.39■□□□□ 0.85
LAMA1P25391 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.39■□□□□ 0.85
LAMA1P25391 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LAMA1P25391 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LAMA1P25391 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LAMA1P25391 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.39■□□□□ 0.85
LAMA1P25391 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LAMA1P25391 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.39■□□□□ 0.85
LAMA1P25391 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LAMA1P25391 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.39■□□□□ 0.85
LAMA1P25391 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.39■□□□□ 0.85
LAMA1P25391 TMPOP1-202ENST00000424642 1267 ntBASIC20.38■□□□□ 0.85
LAMA1P25391 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.38■□□□□ 0.85
LAMA1P25391 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.38■□□□□ 0.85
LAMA1P25391 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.38■□□□□ 0.85
LAMA1P25391 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LAMA1P25391 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LAMA1P25391 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.38■□□□□ 0.85
LAMA1P25391 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.38■□□□□ 0.85
LAMA1P25391 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.38■□□□□ 0.85
LAMA1P25391 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.38■□□□□ 0.85
LAMA1P25391 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LAMA1P25391 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
LAMA1P25391 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
LAMA1P25391 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.37■□□□□ 0.85
LAMA1P25391 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.37■□□□□ 0.85
LAMA1P25391 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LAMA1P25391 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LAMA1P25391 AC092865.7-201ENST00000641832 219 ntBASIC20.36■□□□□ 0.85
LAMA1P25391 KRT17P2-201ENST00000300992 1314 ntBASIC20.36■□□□□ 0.85
LAMA1P25391 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMA1P25391 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LAMA1P25391 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LAMA1P25391 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.36■□□□□ 0.85
LAMA1P25391 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.36■□□□□ 0.85
LAMA1P25391 MIR4785-201ENST00000585005 73 ntBASIC20.36■□□□□ 0.85
LAMA1P25391 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.36■□□□□ 0.85
LAMA1P25391 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
LAMA1P25391 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMA1P25391 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
LAMA1P25391 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.35■□□□□ 0.85
LAMA1P25391 AL023875.1-201ENST00000640777 796 ntBASIC20.35■□□□□ 0.85
LAMA1P25391 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMA1P25391 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMA1P25391 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMA1P25391 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.35■□□□□ 0.85
LAMA1P25391 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMA1P25391 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.35■□□□□ 0.85
LAMA1P25391 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.35■□□□□ 0.85
LAMA1P25391 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
LAMA1P25391 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMA1P25391 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMA1P25391 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMA1P25391 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.35■□□□□ 0.85
LAMA1P25391 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LAMA1P25391 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms