Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.72■□□□□ 0.91
CCND1P24385 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.72■□□□□ 0.91
CCND1P24385 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.72■□□□□ 0.91
CCND1P24385 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.72■□□□□ 0.91
CCND1P24385 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
CCND1P24385 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.71■□□□□ 0.91
CCND1P24385 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCND1P24385 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.71■□□□□ 0.91
CCND1P24385 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCND1P24385 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.71■□□□□ 0.91
CCND1P24385 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.71■□□□□ 0.91
CCND1P24385 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 AP006587.3-201ENST00000525742 1516 ntBASIC20.71■□□□□ 0.91
CCND1P24385 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.71■□□□□ 0.91
CCND1P24385 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCND1P24385 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CCND1P24385 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCND1P24385 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCND1P24385 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCND1P24385 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.71■□□□□ 0.91
CCND1P24385 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.7■□□□□ 0.9
CCND1P24385 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.7■□□□□ 0.9
CCND1P24385 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCND1P24385 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.7■□□□□ 0.9
CCND1P24385 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCND1P24385 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCND1P24385 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.7■□□□□ 0.9
CCND1P24385 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.7■□□□□ 0.9
CCND1P24385 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCND1P24385 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCND1P24385 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.69■□□□□ 0.9
CCND1P24385 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.69■□□□□ 0.9
CCND1P24385 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCND1P24385 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.69■□□□□ 0.9
CCND1P24385 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCND1P24385 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCND1P24385 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.68■□□□□ 0.9
CCND1P24385 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.68■□□□□ 0.9
CCND1P24385 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCND1P24385 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.68■□□□□ 0.9
CCND1P24385 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCND1P24385 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.68■□□□□ 0.9
CCND1P24385 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.68■□□□□ 0.9
CCND1P24385 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCND1P24385 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.68■□□□□ 0.9
CCND1P24385 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCND1P24385 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCND1P24385 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 AC027612.3-201ENST00000413684 1047 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms