Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 AIM26YKL037W 357 nt3.17□□□□□ -1.9
CDC43P18898 PAU23YLR037C 375 nt3.17□□□□□ -1.9
CDC43P18898 YPL142CYPL142C 318 nt3.17□□□□□ -1.9
CDC43P18898 TOM5YPR133W-A 153 nt3.17□□□□□ -1.9
CDC43P18898 EBS1YDR206W 2655 nt3.17□□□□□ -1.9
CDC43P18898 ARG5,6YER069W 2592 nt3.17□□□□□ -1.9
CDC43P18898 GAD1YMR250W 1758 nt3.17□□□□□ -1.9
CDC43P18898 CHD1YER164W 4407 nt3.16□□□□□ -1.9
CDC43P18898 SSP1YHR184W 1716 nt3.16□□□□□ -1.9
CDC43P18898 YDR061WYDR061W 1620 nt3.16□□□□□ -1.9
CDC43P18898 NDT80YHR124W 1884 nt3.16□□□□□ -1.9
CDC43P18898 LCB4YOR171C 1875 nt3.16□□□□□ -1.9
CDC43P18898 YFL063WYFL063W 456 nt3.16□□□□□ -1.9
CDC43P18898 LSM8YJR022W 330 nt3.16□□□□□ -1.9
CDC43P18898 FSH3YOR280C 801 nt3.16□□□□□ -1.9
CDC43P18898 YRM1YOR172W 2361 nt3.16□□□□□ -1.9
CDC43P18898 XRS2YDR369C 2565 nt3.15□□□□□ -1.9
CDC43P18898 JIP3YLR331C 378 nt3.15□□□□□ -1.91
CDC43P18898 PRE8YML092C 753 nt3.15□□□□□ -1.91
CDC43P18898 HSP10YOR020C 321 nt3.15□□□□□ -1.91
CDC43P18898 YPR169W-AYPR169W-A 219 nt3.15□□□□□ -1.91
CDC43P18898 YPR170W-BYPR170W-B 258 nt3.15□□□□□ -1.91
CDC43P18898 PRP22YER013W 3438 nt3.15□□□□□ -1.91
CDC43P18898 TIF4631YGR162W 2859 nt3.15□□□□□ -1.91
CDC43P18898 EMP70YLR083C 2004 nt3.15□□□□□ -1.91
CDC43P18898 FRE4YNR060W 2160 nt3.15□□□□□ -1.91
CDC43P18898 ISW2YOR304W 3363 nt3.15□□□□□ -1.91
CDC43P18898 SMI1YGR229C 1518 nt3.14□□□□□ -1.91
CDC43P18898 SAP4YGL229C 2457 nt3.14□□□□□ -1.91
CDC43P18898 GAC1YOR178C 2382 nt3.14□□□□□ -1.91
CDC43P18898 CYC7YEL039C 342 nt3.14□□□□□ -1.91
CDC43P18898 RPS26BYER131W 360 nt3.14□□□□□ -1.91
CDC43P18898 YFR056CYFR056C 369 nt3.14□□□□□ -1.91
CDC43P18898 BCD1YHR040W 1101 nt3.14□□□□□ -1.91
CDC43P18898 YIL171WYIL171W 330 nt3.14□□□□□ -1.91
CDC43P18898 MSL1YIR009W 336 nt3.14□□□□□ -1.91
CDC43P18898 YJR112W-AYJR112W-A 330 nt3.14□□□□□ -1.91
CDC43P18898 COX7YMR256C 183 nt3.14□□□□□ -1.91
CDC43P18898 PGA1YNL158W 597 nt3.14□□□□□ -1.91
CDC43P18898 RPB11YOL005C 363 nt3.14□□□□□ -1.91
CDC43P18898 NAM2YLR382C 2685 nt3.14□□□□□ -1.91
CDC43P18898 NDD1YOR372C 1665 nt3.14□□□□□ -1.91
CDC43P18898 PBS2YJL128C 2007 nt3.14□□□□□ -1.91
CDC43P18898 ATP17YDR377W 306 nt3.13□□□□□ -1.91
CDC43P18898 RMT2YDR465C 1239 nt3.13□□□□□ -1.91
CDC43P18898 YGL152CYGL152C 678 nt3.13□□□□□ -1.91
CDC43P18898 RPC10YHR143W-A 213 nt3.13□□□□□ -1.91
CDC43P18898 COA3YJL062W-A 258 nt3.13□□□□□ -1.91
CDC43P18898 BLI1YKL061W 342 nt3.13□□□□□ -1.91
CDC43P18898 MRPL20YKR085C 588 nt3.13□□□□□ -1.91
CDC43P18898 FCF2YLR051C 654 nt3.13□□□□□ -1.91
CDC43P18898 TVP18YMR071C 504 nt3.13□□□□□ -1.91
CDC43P18898 YPL039WYPL039W 951 nt3.13□□□□□ -1.91
CDC43P18898 YPR099CYPR099C 357 nt3.13□□□□□ -1.91
CDC43P18898 YBP1YBR216C 2025 nt3.13□□□□□ -1.91
CDC43P18898 ICR1ICR1 3199 nt3.13□□□□□ -1.91
CDC43P18898 ALG8YOR067C 1734 nt3.13□□□□□ -1.91
CDC43P18898 TAF6YGL112C 1551 nt3.12□□□□□ -1.91
CDC43P18898 ATG21YPL100W 1491 nt3.12□□□□□ -1.91
CDC43P18898 YDL228CYDL228C 642 nt3.12□□□□□ -1.91
CDC43P18898 YJL015CYJL015C 285 nt3.12□□□□□ -1.91
CDC43P18898 YKL156C-AYKL156C-A 117 nt3.12□□□□□ -1.91
CDC43P18898 NKP2YLR315W 462 nt3.12□□□□□ -1.91
CDC43P18898 ATG33YLR356W 594 nt3.12□□□□□ -1.91
CDC43P18898 YPL080CYPL080C 327 nt3.12□□□□□ -1.91
CDC43P18898 SLM6YBR266C 453 nt3.12□□□□□ -1.91
CDC43P18898 YKL222CYKL222C 2118 nt3.11□□□□□ -1.91
CDC43P18898 MNN4YKL201C 3537 nt3.11□□□□□ -1.91
CDC43P18898 RPL29YFR032C-A 180 nt3.11□□□□□ -1.91
CDC43P18898 YGR069WYGR069W 336 nt3.11□□□□□ -1.91
CDC43P18898 NOP19YGR251W 591 nt3.11□□□□□ -1.91
CDC43P18898 BAT1YHR208W 1182 nt3.11□□□□□ -1.91
CDC43P18898 PAU14YIL176C 363 nt3.11□□□□□ -1.91
CDC43P18898 RPS21BYJL136C 264 nt3.11□□□□□ -1.91
CDC43P18898 PAU1YJL223C 363 nt3.11□□□□□ -1.91
CDC43P18898 RPL15AYLR029C 615 nt3.11□□□□□ -1.91
CDC43P18898 YBL073WYBL073W 312 nt3.11□□□□□ -1.91
CDC43P18898 ECM16YMR128W 3804 nt3.11□□□□□ -1.91
CDC43P18898 FUN12YAL035W 3009 nt3.11□□□□□ -1.91
CDC43P18898 NRP1YDL167C 2160 nt3.1□□□□□ -1.91
CDC43P18898 YER066C-AYER066C-A 501 nt3.1□□□□□ -1.91
CDC43P18898 RPS0AYGR214W 759 nt3.1□□□□□ -1.91
CDC43P18898 PXR1YGR280C 816 nt3.1□□□□□ -1.91
CDC43P18898 tX(XXX)DtX(XXX)D 100 nt3.1□□□□□ -1.91
CDC43P18898 YIR040CYIR040C 333 nt3.1□□□□□ -1.91
CDC43P18898 RPL14AYKL006W 417 nt3.1□□□□□ -1.91
CDC43P18898 RPL23AYBL087C 414 nt3.1□□□□□ -1.91
CDC43P18898 CIN5YOR028C 888 nt3.1□□□□□ -1.91
CDC43P18898 EGD1YPL037C 474 nt3.1□□□□□ -1.91
CDC43P18898 YPR059CYPR059C 387 nt3.1□□□□□ -1.91
CDC43P18898 YEL1YBL060W 2064 nt3.1□□□□□ -1.91
CDC43P18898 IOC2YLR095C 2439 nt3.1□□□□□ -1.91
CDC43P18898 BAR1YIL015W 1764 nt3.1□□□□□ -1.91
CDC43P18898 YKL100CYKL100C 1764 nt3.1□□□□□ -1.91
CDC43P18898 STU1YBL034C 4542 nt3.09□□□□□ -1.91
CDC43P18898 YLL032CYLL032C 2478 nt3.09□□□□□ -1.91
CDC43P18898 NOT5YPR072W 1683 nt3.09□□□□□ -1.91
CDC43P18898 HMF1YER057C 390 nt3.09□□□□□ -1.91
CDC43P18898 FMP10YER182W 735 nt3.09□□□□□ -1.91
CDC43P18898 YER188C-AYER188C-A 300 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 103.5 ms