Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.51■□□□□ 0.71
NCK1P16333 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.51■□□□□ 0.71
NCK1P16333 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NCK1P16333 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NCK1P16333 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NCK1P16333 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NCK1P16333 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.5■□□□□ 0.71
NCK1P16333 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.5■□□□□ 0.71
NCK1P16333 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.5■□□□□ 0.71
NCK1P16333 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.5■□□□□ 0.71
NCK1P16333 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.5■□□□□ 0.71
NCK1P16333 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.5■□□□□ 0.71
NCK1P16333 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NCK1P16333 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.5■□□□□ 0.71
NCK1P16333 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NCK1P16333 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.49■□□□□ 0.71
NCK1P16333 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.49■□□□□ 0.71
NCK1P16333 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.49■□□□□ 0.71
NCK1P16333 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.49■□□□□ 0.71
NCK1P16333 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.49■□□□□ 0.71
NCK1P16333 AC011298.3-201ENST00000615796 283 ntBASIC19.49■□□□□ 0.71
NCK1P16333 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NCK1P16333 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NCK1P16333 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NCK1P16333 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
NCK1P16333 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 GUSBP5-201ENST00000418136 578 ntBASIC19.48■□□□□ 0.71
NCK1P16333 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.48■□□□□ 0.71
NCK1P16333 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.48■□□□□ 0.71
NCK1P16333 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.48■□□□□ 0.71
NCK1P16333 MIR4466-201ENST00000606121 54 ntBASIC19.48■□□□□ 0.71
NCK1P16333 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NCK1P16333 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.48■□□□□ 0.71
NCK1P16333 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.48■□□□□ 0.71
NCK1P16333 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NCK1P16333 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.48■□□□□ 0.71
NCK1P16333 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NCK1P16333 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
NCK1P16333 BX005040.4-201ENST00000637145 1518 ntBASIC19.47■□□□□ 0.71
NCK1P16333 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NCK1P16333 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.47■□□□□ 0.71
NCK1P16333 DUX4L19-201ENST00000557448 1267 ntBASIC19.47■□□□□ 0.71
NCK1P16333 AL035685.1-201ENST00000636663 812 ntBASIC19.47■□□□□ 0.71
NCK1P16333 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.47■□□□□ 0.71
NCK1P16333 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.47■□□□□ 0.71
NCK1P16333 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NCK1P16333 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NCK1P16333 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NCK1P16333 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NCK1P16333 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.46■□□□□ 0.71
NCK1P16333 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NCK1P16333 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NCK1P16333 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NCK1P16333 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms