Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL4AP11441 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL4AP11441 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL4AP11441 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
UBL4AP11441 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL4AP11441 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL4AP11441 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
UBL4AP11441 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
UBL4AP11441 AC026271.2-201ENST00000428091 497 ntBASIC19.08■□□□□ 0.64
UBL4AP11441 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.08■□□□□ 0.64
UBL4AP11441 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.08■□□□□ 0.64
UBL4AP11441 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.08■□□□□ 0.64
UBL4AP11441 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBL4AP11441 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBL4AP11441 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UBL4AP11441 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBL4AP11441 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBL4AP11441 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.08■□□□□ 0.64
UBL4AP11441 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBL4AP11441 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBL4AP11441 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UBL4AP11441 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UBL4AP11441 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UBL4AP11441 AL158211.5-201ENST00000623583 2518 ntBASIC19.07■□□□□ 0.64
UBL4AP11441 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBL4AP11441 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBL4AP11441 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UBL4AP11441 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBL4AP11441 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBL4AP11441 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBL4AP11441 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBL4AP11441 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBL4AP11441 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.07■□□□□ 0.64
UBL4AP11441 AC007952.6-201ENST00000573168 2673 ntBASIC19.07■□□□□ 0.64
UBL4AP11441 AC003957.1-201ENST00000625108 2673 ntBASIC19.07■□□□□ 0.64
UBL4AP11441 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBL4AP11441 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UBL4AP11441 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBL4AP11441 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
UBL4AP11441 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBL4AP11441 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBL4AP11441 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.06■□□□□ 0.64
UBL4AP11441 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBL4AP11441 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBL4AP11441 AC245052.3-201ENST00000450182 901 ntBASIC19.06■□□□□ 0.64
UBL4AP11441 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.06■□□□□ 0.64
UBL4AP11441 SLC7A5P2-201ENST00000553010 536 ntBASIC19.06■□□□□ 0.64
UBL4AP11441 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.06■□□□□ 0.64
UBL4AP11441 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBL4AP11441 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.06■□□□□ 0.64
UBL4AP11441 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
UBL4AP11441 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.05■□□□□ 0.64
UBL4AP11441 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.05■□□□□ 0.64
UBL4AP11441 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.05■□□□□ 0.64
UBL4AP11441 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
UBL4AP11441 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL4AP11441 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL4AP11441 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL4AP11441 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL4AP11441 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL4AP11441 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL4AP11441 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
UBL4AP11441 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.04■□□□□ 0.64
UBL4AP11441 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.04■□□□□ 0.64
UBL4AP11441 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL4AP11441 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBL4AP11441 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBL4AP11441 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.03■□□□□ 0.64
UBL4AP11441 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.03■□□□□ 0.64
UBL4AP11441 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 KRT18P5-201ENST00000436075 1291 ntBASIC19.03■□□□□ 0.64
UBL4AP11441 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
UBL4AP11441 MIR5787-201ENST00000611784 55 ntBASIC19.03■□□□□ 0.64
UBL4AP11441 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL4AP11441 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UBL4AP11441 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.02■□□□□ 0.64
UBL4AP11441 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBL4AP11441 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms