Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 AC073314.1-201ENST00000568729 2216 ntBASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HNRNPCL4P0DMR1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 MIR638-201ENST00000385237 100 ntBASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HNRNPCL4P0DMR1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 AC123595.1-201ENST00000440769 1046 ntBASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 AC010141.2-201ENST00000452426 721 ntBASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HNRNPCL4P0DMR1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 AC245052.3-201ENST00000450182 901 ntBASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 RARRES2P11-201ENST00000635158 484 ntBASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 AC092667.1-201ENST00000434301 2586 ntBASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HNRNPCL4P0DMR1 AC027702.1-201ENST00000563810 1770 ntBASIC19.14■□□□□ 0.66
HNRNPCL4P0DMR1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 FP700111.2-201ENST00000619190 1892 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4L2-201ENST00000561772 1275 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4L6-201ENST00000626483 1275 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4L1-201ENST00000627662 1275 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4L8-201ENST00000629013 1275 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4L3-201ENST00000630187 1275 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4L7-201ENST00000630678 1275 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 DUX4L5-201ENST00000630834 1275 ntBASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HNRNPCL4P0DMR1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms