Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
SNRPA1P09661 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.51■■□□□ 1.83
SNRPA1P09661 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNRPA1P09661 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
SNRPA1P09661 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.5■■□□□ 1.83
SNRPA1P09661 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SNRPA1P09661 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.5■■□□□ 1.83
SNRPA1P09661 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNRPA1P09661 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.5■■□□□ 1.83
SNRPA1P09661 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNRPA1P09661 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.5■■□□□ 1.83
SNRPA1P09661 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.5■■□□□ 1.83
SNRPA1P09661 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNRPA1P09661 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNRPA1P09661 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNRPA1P09661 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNRPA1P09661 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNRPA1P09661 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.49■■□□□ 1.83
SNRPA1P09661 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.49■■□□□ 1.83
SNRPA1P09661 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.49■■□□□ 1.83
SNRPA1P09661 AC142381.4-202ENST00000563973 229 ntBASIC26.49■■□□□ 1.83
SNRPA1P09661 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNRPA1P09661 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SNRPA1P09661 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNRPA1P09661 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNRPA1P09661 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.48■■□□□ 1.83
SNRPA1P09661 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
SNRPA1P09661 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.48■■□□□ 1.83
SNRPA1P09661 AC092368.3-202ENST00000574180 1591 ntBASIC26.48■■□□□ 1.83
SNRPA1P09661 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.48■■□□□ 1.83
SNRPA1P09661 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRPA1P09661 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SNRPA1P09661 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNRPA1P09661 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
SNRPA1P09661 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNRPA1P09661 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SNRPA1P09661 UNC93B4-201ENST00000505679 747 ntBASIC26.47■■□□□ 1.83
SNRPA1P09661 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNRPA1P09661 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRPA1P09661 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SNRPA1P09661 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
SNRPA1P09661 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SNRPA1P09661 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.46■■□□□ 1.83
SNRPA1P09661 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRPA1P09661 AL158047.1-201ENST00000445918 881 ntBASIC26.46■■□□□ 1.83
SNRPA1P09661 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.46■■□□□ 1.83
SNRPA1P09661 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.46■■□□□ 1.83
SNRPA1P09661 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRPA1P09661 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SNRPA1P09661 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SNRPA1P09661 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
SNRPA1P09661 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SNRPA1P09661 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNRPA1P09661 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SNRPA1P09661 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SNRPA1P09661 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SNRPA1P09661 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
SNRPA1P09661 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SNRPA1P09661 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.45■■□□□ 1.82
SNRPA1P09661 AC087633.2-202ENST00000565166 1439 ntBASIC26.45■■□□□ 1.82
SNRPA1P09661 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNRPA1P09661 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.45■■□□□ 1.82
SNRPA1P09661 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.45■■□□□ 1.82
SNRPA1P09661 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNRPA1P09661 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNRPA1P09661 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.44■■□□□ 1.82
SNRPA1P09661 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNRPA1P09661 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNRPA1P09661 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.44■■□□□ 1.82
SNRPA1P09661 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.44■■□□□ 1.82
SNRPA1P09661 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.44■■□□□ 1.82
SNRPA1P09661 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.44■■□□□ 1.82
SNRPA1P09661 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.44■■□□□ 1.82
SNRPA1P09661 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SNRPA1P09661 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.44■■□□□ 1.82
SNRPA1P09661 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.44■■□□□ 1.82
SNRPA1P09661 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.44■■□□□ 1.82
SNRPA1P09661 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNRPA1P09661 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNRPA1P09661 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.43■■□□□ 1.82
SNRPA1P09661 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNRPA1P09661 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNRPA1P09661 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNRPA1P09661 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNRPA1P09661 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNRPA1P09661 AP006294.2-201ENST00000641667 209 ntBASIC26.43■■□□□ 1.82
SNRPA1P09661 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms