Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSF1P09603 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSF1P09603 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 AC003102.1-202ENST00000563394 1796 ntBASIC17.82■□□□□ 0.44
CSF1P09603 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.82■□□□□ 0.44
CSF1P09603 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CSF1P09603 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.82■□□□□ 0.44
CSF1P09603 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CSF1P09603 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSF1P09603 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CSF1P09603 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CSF1P09603 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CSF1P09603 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.81■□□□□ 0.44
CSF1P09603 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.81■□□□□ 0.44
CSF1P09603 MIR939-201ENST00000401314 82 ntBASIC17.81■□□□□ 0.44
CSF1P09603 AC091305.1-201ENST00000479476 895 ntBASIC17.81■□□□□ 0.44
CSF1P09603 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.81■□□□□ 0.44
CSF1P09603 AC087239.1-201ENST00000622671 572 ntBASIC17.81■□□□□ 0.44
CSF1P09603 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.81■□□□□ 0.44
CSF1P09603 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.81■□□□□ 0.44
CSF1P09603 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSF1P09603 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CSF1P09603 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CSF1P09603 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSF1P09603 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSF1P09603 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.8■□□□□ 0.44
CSF1P09603 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.8■□□□□ 0.44
CSF1P09603 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSF1P09603 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CSF1P09603 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.8■□□□□ 0.44
CSF1P09603 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSF1P09603 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSF1P09603 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
CSF1P09603 AP001330.3-201ENST00000520123 633 ntBASIC17.8■□□□□ 0.44
CSF1P09603 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CSF1P09603 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.8■□□□□ 0.44
CSF1P09603 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.8■□□□□ 0.44
CSF1P09603 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CSF1P09603 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CSF1P09603 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.8■□□□□ 0.44
CSF1P09603 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.8■□□□□ 0.44
CSF1P09603 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.8■□□□□ 0.44
CSF1P09603 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSF1P09603 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSF1P09603 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSF1P09603 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CSF1P09603 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CSF1P09603 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSF1P09603 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSF1P09603 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSF1P09603 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.79■□□□□ 0.44
CSF1P09603 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CSF1P09603 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
CSF1P09603 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.79■□□□□ 0.44
CSF1P09603 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.79■□□□□ 0.44
CSF1P09603 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSF1P09603 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSF1P09603 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.79■□□□□ 0.44
CSF1P09603 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.79■□□□□ 0.44
CSF1P09603 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.79■□□□□ 0.44
CSF1P09603 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.78■□□□□ 0.44
CSF1P09603 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.78■□□□□ 0.44
CSF1P09603 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.78■□□□□ 0.44
CSF1P09603 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.78■□□□□ 0.44
CSF1P09603 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.78■□□□□ 0.44
CSF1P09603 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSF1P09603 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms