Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
MT-ND3P03897 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MT-ND3P03897 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.98■□□□□ 0.95
MT-ND3P03897 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.98■□□□□ 0.95
MT-ND3P03897 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
MT-ND3P03897 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MT-ND3P03897 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
MT-ND3P03897 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.98■□□□□ 0.95
MT-ND3P03897 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.98■□□□□ 0.95
MT-ND3P03897 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.98■□□□□ 0.95
MT-ND3P03897 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
MT-ND3P03897 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
MT-ND3P03897 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.98■□□□□ 0.95
MT-ND3P03897 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MT-ND3P03897 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-ND3P03897 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.97■□□□□ 0.95
MT-ND3P03897 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-ND3P03897 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.97■□□□□ 0.95
MT-ND3P03897 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
MT-ND3P03897 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.97■□□□□ 0.95
MT-ND3P03897 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.97■□□□□ 0.95
MT-ND3P03897 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.97■□□□□ 0.95
MT-ND3P03897 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
MT-ND3P03897 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MT-ND3P03897 AC121338.2-201ENST00000622535 1744 ntBASIC20.96■□□□□ 0.95
MT-ND3P03897 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.96■□□□□ 0.95
MT-ND3P03897 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
MT-ND3P03897 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.96■□□□□ 0.95
MT-ND3P03897 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MT-ND3P03897 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.96■□□□□ 0.95
MT-ND3P03897 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
MT-ND3P03897 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.96■□□□□ 0.95
MT-ND3P03897 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MT-ND3P03897 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.95■□□□□ 0.94
MT-ND3P03897 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.95■□□□□ 0.94
MT-ND3P03897 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.95■□□□□ 0.94
MT-ND3P03897 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MT-ND3P03897 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.95■□□□□ 0.94
MT-ND3P03897 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MT-ND3P03897 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MT-ND3P03897 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND3P03897 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
MT-ND3P03897 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND3P03897 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.94■□□□□ 0.94
MT-ND3P03897 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.94■□□□□ 0.94
MT-ND3P03897 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.94■□□□□ 0.94
MT-ND3P03897 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
MT-ND3P03897 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND3P03897 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND3P03897 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MT-ND3P03897 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND3P03897 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.94■□□□□ 0.94
MT-ND3P03897 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND3P03897 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
MT-ND3P03897 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MT-ND3P03897 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
MT-ND3P03897 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms