Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CLPTM1O96005 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.45■□□□□ 0.7
CLPTM1O96005 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CLPTM1O96005 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 MIR4466-201ENST00000606121 54 ntBASIC19.45■□□□□ 0.7
CLPTM1O96005 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.45■□□□□ 0.7
CLPTM1O96005 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.45■□□□□ 0.7
CLPTM1O96005 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLPTM1O96005 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.45■□□□□ 0.7
CLPTM1O96005 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLPTM1O96005 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLPTM1O96005 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
CLPTM1O96005 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 AP000974.1-201ENST00000623909 2387 ntBASIC19.44■□□□□ 0.7
CLPTM1O96005 AC004408.2-201ENST00000623613 2777 ntBASIC19.44■□□□□ 0.7
CLPTM1O96005 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
CLPTM1O96005 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLPTM1O96005 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CLPTM1O96005 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CLPTM1O96005 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.44■□□□□ 0.7
CLPTM1O96005 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.44■□□□□ 0.7
CLPTM1O96005 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.44■□□□□ 0.7
CLPTM1O96005 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CLPTM1O96005 TNXA-203ENST00000507684 2038 ntBASIC19.44■□□□□ 0.7
CLPTM1O96005 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLPTM1O96005 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1O96005 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.43■□□□□ 0.7
CLPTM1O96005 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1O96005 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1O96005 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1O96005 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CLPTM1O96005 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLPTM1O96005 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.43■□□□□ 0.7
CLPTM1O96005 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CLPTM1O96005 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.43■□□□□ 0.7
CLPTM1O96005 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1O96005 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLPTM1O96005 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.43■□□□□ 0.7
CLPTM1O96005 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1O96005 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLPTM1O96005 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLPTM1O96005 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.43■□□□□ 0.7
CLPTM1O96005 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLPTM1O96005 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.42■□□□□ 0.7
CLPTM1O96005 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.42■□□□□ 0.7
CLPTM1O96005 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLPTM1O96005 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.42■□□□□ 0.7
CLPTM1O96005 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CLPTM1O96005 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLPTM1O96005 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 AL136116.3-201ENST00000402907 1138 ntBASIC19.42■□□□□ 0.7
CLPTM1O96005 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.42■□□□□ 0.7
CLPTM1O96005 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLPTM1O96005 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLPTM1O96005 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.42■□□□□ 0.7
CLPTM1O96005 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.42■□□□□ 0.7
CLPTM1O96005 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.42■□□□□ 0.7
CLPTM1O96005 AC027702.1-201ENST00000563810 1770 ntBASIC19.42■□□□□ 0.7
CLPTM1O96005 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLPTM1O96005 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLPTM1O96005 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.41■□□□□ 0.7
CLPTM1O96005 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.41■□□□□ 0.7
CLPTM1O96005 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLPTM1O96005 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms