Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 AC004854.2-201ENST00000608450 1441 ntBASIC20.76■□□□□ 0.91
VAPBO95292 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.76■□□□□ 0.91
VAPBO95292 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VAPBO95292 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VAPBO95292 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.76■□□□□ 0.91
VAPBO95292 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
VAPBO95292 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
VAPBO95292 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.75■□□□□ 0.91
VAPBO95292 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
VAPBO95292 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
VAPBO95292 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 SLC7A5P2-201ENST00000553010 536 ntBASIC20.75■□□□□ 0.91
VAPBO95292 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
VAPBO95292 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.75■□□□□ 0.91
VAPBO95292 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
VAPBO95292 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VAPBO95292 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 LINC01521-201ENST00000504184 1943 ntBASIC20.74■□□□□ 0.91
VAPBO95292 AC011484.1-201ENST00000377652 1995 ntBASIC20.74■□□□□ 0.91
VAPBO95292 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
VAPBO95292 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VAPBO95292 RARRES2P11-201ENST00000635158 484 ntBASIC20.74■□□□□ 0.91
VAPBO95292 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VAPBO95292 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VAPBO95292 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VAPBO95292 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 AC092667.1-201ENST00000434301 2586 ntBASIC20.73■□□□□ 0.91
VAPBO95292 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.73■□□□□ 0.91
VAPBO95292 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.73■□□□□ 0.91
VAPBO95292 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.73■□□□□ 0.91
VAPBO95292 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VAPBO95292 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.73■□□□□ 0.91
VAPBO95292 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VAPBO95292 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
VAPBO95292 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VAPBO95292 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
VAPBO95292 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.72■□□□□ 0.91
VAPBO95292 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VAPBO95292 AC007225.1-201ENST00000566331 1836 ntBASIC20.72■□□□□ 0.91
VAPBO95292 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.72■□□□□ 0.91
VAPBO95292 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 AC245052.3-201ENST00000450182 901 ntBASIC20.72■□□□□ 0.91
VAPBO95292 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.72■□□□□ 0.91
VAPBO95292 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.72■□□□□ 0.91
VAPBO95292 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.72■□□□□ 0.91
VAPBO95292 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VAPBO95292 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.71■□□□□ 0.91
VAPBO95292 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VAPBO95292 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VAPBO95292 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.71■□□□□ 0.91
VAPBO95292 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VAPBO95292 AC073314.1-201ENST00000568729 2216 ntBASIC20.71■□□□□ 0.91
VAPBO95292 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VAPBO95292 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms