Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE3O75131 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE3O75131 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPNE3O75131 BX276092.2-201ENST00000417668 665 ntBASIC19.8■□□□□ 0.76
CPNE3O75131 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE3O75131 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.8■□□□□ 0.76
CPNE3O75131 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.8■□□□□ 0.76
CPNE3O75131 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.8■□□□□ 0.76
CPNE3O75131 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.8■□□□□ 0.76
CPNE3O75131 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE3O75131 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.79■□□□□ 0.76
CPNE3O75131 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CPNE3O75131 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE3O75131 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CPNE3O75131 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPNE3O75131 TSPY20P-201ENST00000450910 630 ntBASIC19.79■□□□□ 0.76
CPNE3O75131 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.79■□□□□ 0.76
CPNE3O75131 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.79■□□□□ 0.76
CPNE3O75131 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CPNE3O75131 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPNE3O75131 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPNE3O75131 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE3O75131 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CPNE3O75131 AC010980.2-201ENST00000587099 1412 ntBASIC19.78■□□□□ 0.76
CPNE3O75131 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE3O75131 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.78■□□□□ 0.76
CPNE3O75131 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.78■□□□□ 0.76
CPNE3O75131 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.78■□□□□ 0.76
CPNE3O75131 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.78■□□□□ 0.76
CPNE3O75131 TMEM191A-211ENST00000637163 1067 ntBASIC19.78■□□□□ 0.76
CPNE3O75131 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE3O75131 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE3O75131 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE3O75131 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CPNE3O75131 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CPNE3O75131 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CPNE3O75131 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.77■□□□□ 0.76
CPNE3O75131 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.77■□□□□ 0.76
CPNE3O75131 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.77■□□□□ 0.76
CPNE3O75131 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CPNE3O75131 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE3O75131 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPNE3O75131 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CPNE3O75131 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.76■□□□□ 0.75
CPNE3O75131 C11orf96-202ENST00000528572 1834 ntBASIC19.76■□□□□ 0.75
CPNE3O75131 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.76■□□□□ 0.75
CPNE3O75131 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE3O75131 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE3O75131 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.76■□□□□ 0.75
CPNE3O75131 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 CDV3P1-201ENST00000471403 739 ntBASIC19.76■□□□□ 0.75
CPNE3O75131 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE3O75131 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.76■□□□□ 0.75
CPNE3O75131 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.76■□□□□ 0.75
CPNE3O75131 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CPNE3O75131 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CPNE3O75131 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CPNE3O75131 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE3O75131 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms