Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.34■■□□□ 1.01
ACSL4O60488 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.34■■□□□ 1.01
ACSL4O60488 AC100791.3-201ENST00000617619 330 ntBASIC21.34■■□□□ 1.01
ACSL4O60488 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ACSL4O60488 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
ACSL4O60488 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ACSL4O60488 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ACSL4O60488 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
ACSL4O60488 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.34■■□□□ 1.01
ACSL4O60488 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ACSL4O60488 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
ACSL4O60488 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ACSL4O60488 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ACSL4O60488 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ACSL4O60488 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ACSL4O60488 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.33■■□□□ 1.01
ACSL4O60488 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.33■■□□□ 1.01
ACSL4O60488 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.33■■□□□ 1.01
ACSL4O60488 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.33■■□□□ 1.01
ACSL4O60488 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.33■■□□□ 1.01
ACSL4O60488 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.33■■□□□ 1.01
ACSL4O60488 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.33■■□□□ 1.01
ACSL4O60488 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.33■■□□□ 1.01
ACSL4O60488 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ACSL4O60488 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.33■■□□□ 1
ACSL4O60488 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.33■■□□□ 1
ACSL4O60488 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.33■■□□□ 1
ACSL4O60488 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.33■■□□□ 1
ACSL4O60488 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.33■■□□□ 1
ACSL4O60488 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.33■■□□□ 1
ACSL4O60488 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ACSL4O60488 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.32■■□□□ 1
ACSL4O60488 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ACSL4O60488 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ACSL4O60488 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.32■■□□□ 1
ACSL4O60488 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ACSL4O60488 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ACSL4O60488 BX276092.2-201ENST00000417668 665 ntBASIC21.32■■□□□ 1
ACSL4O60488 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.32■■□□□ 1
ACSL4O60488 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ACSL4O60488 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.32■■□□□ 1
ACSL4O60488 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACSL4O60488 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 MIR4758-201ENST00000577688 71 ntBASIC21.31■■□□□ 1
ACSL4O60488 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.31■■□□□ 1
ACSL4O60488 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ACSL4O60488 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
ACSL4O60488 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ACSL4O60488 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACSL4O60488 AL049796.1-201ENST00000565336 1766 ntBASIC21.31■■□□□ 1
ACSL4O60488 FEM1AP4-201ENST00000443167 1987 ntBASIC21.3■■□□□ 1
ACSL4O60488 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACSL4O60488 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACSL4O60488 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACSL4O60488 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACSL4O60488 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ACSL4O60488 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.3■■□□□ 1
ACSL4O60488 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.3■■□□□ 1
ACSL4O60488 AC069152.1-201ENST00000438030 544 ntBASIC21.3■■□□□ 1
ACSL4O60488 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.3■■□□□ 1
ACSL4O60488 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.3■■□□□ 1
ACSL4O60488 AC133041.1-202ENST00000642053 222 ntBASIC21.3■■□□□ 1
ACSL4O60488 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.3■■□□□ 1
ACSL4O60488 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACSL4O60488 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.3■■□□□ 1
ACSL4O60488 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ACSL4O60488 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.29■■□□□ 1
ACSL4O60488 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ACSL4O60488 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 MCRIP2P1-201ENST00000394346 511 ntBASIC21.29■■□□□ 1
ACSL4O60488 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ACSL4O60488 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.29■■□□□ 1
ACSL4O60488 AL355472.2-201ENST00000422958 438 ntBASIC21.29■■□□□ 1
ACSL4O60488 AC073210.2-201ENST00000430369 194 ntBASIC21.29■■□□□ 1
ACSL4O60488 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.29■■□□□ 1
ACSL4O60488 AC098934.4-201ENST00000564127 592 ntBASIC21.29■■□□□ 1
ACSL4O60488 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
ACSL4O60488 CYP2T3P-201ENST00000601990 817 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms