Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
URB1O60287 AC239809.2-201ENST00000415381 517 ntBASIC19.55■□□□□ 0.72
URB1O60287 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.55■□□□□ 0.72
URB1O60287 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.55■□□□□ 0.72
URB1O60287 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.55■□□□□ 0.72
URB1O60287 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.55■□□□□ 0.72
URB1O60287 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
URB1O60287 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.55■□□□□ 0.72
URB1O60287 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.55■□□□□ 0.72
URB1O60287 AC061975.6-201ENST00000579045 1553 ntBASIC19.55■□□□□ 0.72
URB1O60287 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
URB1O60287 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.55■□□□□ 0.72
URB1O60287 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
URB1O60287 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.55■□□□□ 0.72
URB1O60287 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
URB1O60287 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
URB1O60287 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
URB1O60287 KRT18P68-201ENST00000392293 1000 ntBASIC19.54■□□□□ 0.72
URB1O60287 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
URB1O60287 RARRES2P10-201ENST00000564312 460 ntBASIC19.54■□□□□ 0.72
URB1O60287 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
URB1O60287 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
URB1O60287 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
URB1O60287 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
URB1O60287 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
URB1O60287 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
URB1O60287 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
URB1O60287 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.54■□□□□ 0.72
URB1O60287 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.54■□□□□ 0.72
URB1O60287 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.54■□□□□ 0.72
URB1O60287 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.53■□□□□ 0.72
URB1O60287 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
URB1O60287 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
URB1O60287 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
URB1O60287 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.53■□□□□ 0.72
URB1O60287 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.53■□□□□ 0.72
URB1O60287 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.53■□□□□ 0.72
URB1O60287 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.53■□□□□ 0.72
URB1O60287 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.53■□□□□ 0.72
URB1O60287 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
URB1O60287 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.53■□□□□ 0.72
URB1O60287 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.53■□□□□ 0.72
URB1O60287 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
URB1O60287 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.53■□□□□ 0.72
URB1O60287 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.53■□□□□ 0.72
URB1O60287 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
URB1O60287 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.53■□□□□ 0.72
URB1O60287 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
URB1O60287 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
URB1O60287 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
URB1O60287 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
URB1O60287 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.52■□□□□ 0.72
URB1O60287 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
URB1O60287 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.52■□□□□ 0.72
URB1O60287 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
URB1O60287 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.52■□□□□ 0.72
URB1O60287 AC113410.3-201ENST00000623366 203 ntBASIC19.52■□□□□ 0.72
URB1O60287 AL590326.2-201ENST00000625139 305 ntBASIC19.52■□□□□ 0.72
URB1O60287 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.52■□□□□ 0.72
URB1O60287 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
URB1O60287 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
URB1O60287 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
URB1O60287 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
URB1O60287 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
URB1O60287 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
URB1O60287 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
URB1O60287 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.51■□□□□ 0.71
URB1O60287 FAM21FP-204ENST00000608637 956 ntBASIC19.51■□□□□ 0.71
URB1O60287 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.51■□□□□ 0.71
URB1O60287 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.51■□□□□ 0.71
URB1O60287 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
URB1O60287 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
URB1O60287 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.51■□□□□ 0.71
URB1O60287 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
URB1O60287 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.5■□□□□ 0.71
URB1O60287 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
URB1O60287 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.5■□□□□ 0.71
URB1O60287 AC092068.2-201ENST00000590491 1708 ntBASIC19.5■□□□□ 0.71
URB1O60287 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
URB1O60287 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms