Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.05■□□□□ 0.96
MATN3O15232 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.05■□□□□ 0.96
MATN3O15232 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MATN3O15232 DUX4L16-201ENST00000555130 1264 ntBASIC21.05■□□□□ 0.96
MATN3O15232 BID-214ENST00000617586 542 ntTSL 5 BASIC21.05■□□□□ 0.96
MATN3O15232 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MATN3O15232 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
MATN3O15232 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.04■□□□□ 0.96
MATN3O15232 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.04■□□□□ 0.96
MATN3O15232 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.04■□□□□ 0.96
MATN3O15232 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.04■□□□□ 0.96
MATN3O15232 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.04■□□□□ 0.96
MATN3O15232 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.04■□□□□ 0.96
MATN3O15232 AC092437.1-201ENST00000624794 1048 ntBASIC21.04■□□□□ 0.96
MATN3O15232 AC013268.1-206ENST00000638368 961 ntBASIC21.04■□□□□ 0.96
MATN3O15232 AC112229.1-201ENST00000639295 961 ntBASIC21.04■□□□□ 0.96
MATN3O15232 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.04■□□□□ 0.96
MATN3O15232 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.04■□□□□ 0.96
MATN3O15232 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MATN3O15232 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
MATN3O15232 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.03■□□□□ 0.96
MATN3O15232 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.03■□□□□ 0.96
MATN3O15232 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MATN3O15232 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.03■□□□□ 0.96
MATN3O15232 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.03■□□□□ 0.96
MATN3O15232 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MATN3O15232 AC007322.4-201ENST00000509611 723 ntBASIC21.03■□□□□ 0.96
MATN3O15232 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MATN3O15232 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MATN3O15232 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.03■□□□□ 0.96
MATN3O15232 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.03■□□□□ 0.96
MATN3O15232 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MATN3O15232 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MATN3O15232 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.02■□□□□ 0.96
MATN3O15232 AC007322.3-201ENST00000426526 701 ntBASIC21.02■□□□□ 0.96
MATN3O15232 CDV3P1-201ENST00000471403 739 ntBASIC21.02■□□□□ 0.96
MATN3O15232 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MATN3O15232 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 AL591742.1-201ENST00000604433 565 ntBASIC21.02■□□□□ 0.96
MATN3O15232 IKBKGP1-201ENST00000612193 1073 ntBASIC21.02■□□□□ 0.96
MATN3O15232 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.02■□□□□ 0.96
MATN3O15232 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
MATN3O15232 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.02■□□□□ 0.96
MATN3O15232 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.02■□□□□ 0.96
MATN3O15232 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MATN3O15232 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MATN3O15232 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.02■□□□□ 0.95
MATN3O15232 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MATN3O15232 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
MATN3O15232 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.01■□□□□ 0.95
MATN3O15232 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.01■□□□□ 0.95
MATN3O15232 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MATN3O15232 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MATN3O15232 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
MATN3O15232 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21■□□□□ 0.95
MATN3O15232 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21■□□□□ 0.95
MATN3O15232 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21■□□□□ 0.95
MATN3O15232 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MATN3O15232 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21■□□□□ 0.95
MATN3O15232 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MATN3O15232 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms