Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AF186192.3-201ENST00000583427 947 ntBASIC34.04■■■■□ 3.04
CHD1O14646 RPS15-203ENST00000586096 570 ntTSL 2 BASIC34.04■■■■□ 3.04
CHD1O14646 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CHD1O14646 SAPCD2P4-201ENST00000424595 1171 ntBASIC34.04■■■■□ 3.04
CHD1O14646 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC34.04■■■■□ 3.04
CHD1O14646 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC34.04■■■■□ 3.04
CHD1O14646 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC34.03■■■■□ 3.04
CHD1O14646 SRI-203ENST00000419179 1307 ntTSL 2 BASIC34.03■■■■□ 3.04
CHD1O14646 AC087633.2-202ENST00000565166 1439 ntBASIC34.03■■■■□ 3.04
CHD1O14646 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC34.03■■■■□ 3.04
CHD1O14646 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC34.03■■■■□ 3.04
CHD1O14646 AC005829.2-201ENST00000571422 1056 ntBASIC34.03■■■■□ 3.04
CHD1O14646 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC34.03■■■■□ 3.04
CHD1O14646 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC34.02■■■■□ 3.04
CHD1O14646 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC34.02■■■■□ 3.04
CHD1O14646 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC34.02■■■■□ 3.04
CHD1O14646 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC34.02■■■■□ 3.04
CHD1O14646 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
CHD1O14646 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
CHD1O14646 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC34.01■■■■□ 3.04
CHD1O14646 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.04
CHD1O14646 AL390955.1-201ENST00000428694 934 ntBASIC34.01■■■■□ 3.04
CHD1O14646 AL355355.2-201ENST00000442321 338 ntBASIC34.01■■■■□ 3.04
CHD1O14646 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
CHD1O14646 WWOX-216ENST00000569818 525 ntBASIC34.01■■■■□ 3.04
CHD1O14646 AP000525.1-201ENST00000608286 694 ntBASIC34.01■■■■□ 3.04
CHD1O14646 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC34.01■■■■□ 3.04
CHD1O14646 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
CHD1O14646 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
CHD1O14646 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC34.01■■■■□ 3.03
CHD1O14646 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC34.01■■■■□ 3.03
CHD1O14646 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC34.01■■■■□ 3.03
CHD1O14646 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC34.01■■■■□ 3.03
CHD1O14646 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
CHD1O14646 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.03
CHD1O14646 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
CHD1O14646 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
CHD1O14646 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC34■■■■□ 3.03
CHD1O14646 CFL2-205ENST00000555765 632 ntTSL 2 BASIC34■■■■□ 3.03
CHD1O14646 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC34■■■■□ 3.03
CHD1O14646 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC34■■■■□ 3.03
CHD1O14646 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC34■■■■□ 3.03
CHD1O14646 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC34■■■■□ 3.03
CHD1O14646 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1O14646 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC33.99■■■■□ 3.03
CHD1O14646 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1O14646 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC33.99■■■■□ 3.03
CHD1O14646 RER1-204ENST00000378518 522 ntTSL 3 BASIC33.99■■■■□ 3.03
CHD1O14646 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC33.99■■■■□ 3.03
CHD1O14646 NMU-205ENST00000511469 756 ntTSL 3 BASIC33.99■■■■□ 3.03
CHD1O14646 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC33.99■■■■□ 3.03
CHD1O14646 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC33.99■■■■□ 3.03
CHD1O14646 AL031963.3-201ENST00000606441 850 ntBASIC33.99■■■■□ 3.03
CHD1O14646 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1O14646 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1O14646 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1O14646 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1O14646 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1O14646 TOLLIP-AS1-201ENST00000530897 939 ntBASIC33.99■■■■□ 3.03
CHD1O14646 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC33.98■■■■□ 3.03
CHD1O14646 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
CHD1O14646 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
CHD1O14646 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC33.98■■■■□ 3.03
CHD1O14646 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC33.98■■■■□ 3.03
CHD1O14646 GLDC-219ENST00000640208 420 ntTSL 2 BASIC33.98■■■■□ 3.03
CHD1O14646 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CHD1O14646 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC33.97■■■■□ 3.03
CHD1O14646 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC33.97■■■■□ 3.03
CHD1O14646 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CHD1O14646 HES2-206ENST00000489730 730 ntTSL 2 BASIC33.97■■■■□ 3.03
CHD1O14646 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC33.97■■■■□ 3.03
CHD1O14646 MOK-233ENST00000524214 1539 ntTSL 2 BASIC33.97■■■■□ 3.03
CHD1O14646 LINC01568-207ENST00000641790 1380 ntBASIC33.97■■■■□ 3.03
CHD1O14646 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CHD1O14646 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC33.97■■■■□ 3.03
CHD1O14646 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC33.97■■■■□ 3.03
CHD1O14646 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC33.97■■■■□ 3.03
CHD1O14646 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC33.96■■■■□ 3.03
CHD1O14646 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
CHD1O14646 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
CHD1O14646 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC33.96■■■■□ 3.03
CHD1O14646 LTBR-211ENST00000543190 785 ntTSL 3 BASIC33.96■■■■□ 3.03
CHD1O14646 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC33.96■■■■□ 3.03
CHD1O14646 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC33.96■■■■□ 3.03
CHD1O14646 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC33.96■■■■□ 3.03
CHD1O14646 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC33.96■■■■□ 3.03
CHD1O14646 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC33.96■■■■□ 3.03
CHD1O14646 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC33.96■■■■□ 3.03
CHD1O14646 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC33.96■■■■□ 3.03
CHD1O14646 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC33.96■■■■□ 3.03
CHD1O14646 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
CHD1O14646 ANOS2P-203ENST00000472227 1816 ntBASIC33.95■■■■□ 3.03
CHD1O14646 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC33.95■■■■□ 3.03
CHD1O14646 UNC93B2-201ENST00000285383 730 ntBASIC33.95■■■■□ 3.03
CHD1O14646 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
CHD1O14646 FAM197Y1-201ENST00000421178 764 ntBASIC33.95■■■■□ 3.03
CHD1O14646 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC33.95■■■■□ 3.03
CHD1O14646 AL353807.1-201ENST00000427475 662 ntBASIC33.95■■■■□ 3.03
CHD1O14646 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC33.95■■■■□ 3.03
CHD1O14646 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC33.95■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms