Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN4O14493 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN4O14493 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN4O14493 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN4O14493 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLDN4O14493 CNN2P6-201ENST00000439038 900 ntBASIC19.49■□□□□ 0.71
CLDN4O14493 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN4O14493 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN4O14493 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN4O14493 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDN4O14493 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN4O14493 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN4O14493 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN4O14493 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLDN4O14493 AC116050.2-201ENST00000612102 1779 ntBASIC19.48■□□□□ 0.71
CLDN4O14493 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN4O14493 AC005181.1-201ENST00000604782 1256 ntBASIC19.48■□□□□ 0.71
CLDN4O14493 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.48■□□□□ 0.71
CLDN4O14493 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN4O14493 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLDN4O14493 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLDN4O14493 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN4O14493 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLDN4O14493 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN4O14493 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.47■□□□□ 0.71
CLDN4O14493 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CLDN4O14493 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN4O14493 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.47■□□□□ 0.71
CLDN4O14493 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 AC008694.1-202ENST00000636953 945 ntBASIC19.47■□□□□ 0.71
CLDN4O14493 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLDN4O14493 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN4O14493 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.46■□□□□ 0.71
CLDN4O14493 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLDN4O14493 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN4O14493 AC068338.2-201ENST00000563278 1430 ntBASIC19.46■□□□□ 0.71
CLDN4O14493 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 AC069236.1-201ENST00000604339 616 ntBASIC19.46■□□□□ 0.71
CLDN4O14493 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLDN4O14493 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN4O14493 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN4O14493 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CLDN4O14493 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLDN4O14493 AC007322.3-201ENST00000426526 701 ntBASIC19.45■□□□□ 0.7
CLDN4O14493 AC006970.2-201ENST00000450065 779 ntBASIC19.45■□□□□ 0.7
CLDN4O14493 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN4O14493 RAP2CP1-201ENST00000605103 478 ntBASIC19.45■□□□□ 0.7
CLDN4O14493 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLDN4O14493 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.45■□□□□ 0.7
CLDN4O14493 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.45■□□□□ 0.7
CLDN4O14493 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN4O14493 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN4O14493 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN4O14493 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN4O14493 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN4O14493 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms