Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 AL355802.2-201ENST00000402069 882 ntBASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 AC079140.4-201ENST00000507448 529 ntBASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SPDYE4A6NLX3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SPDYE4A6NLX3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.1■■□□□ 1.29
SPDYE4A6NLX3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 KRT18P11-201ENST00000435214 1283 ntBASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 AL109923.1-201ENST00000618799 583 ntBASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.09■■□□□ 1.29
SPDYE4A6NLX3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SPDYE4A6NLX3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SPDYE4A6NLX3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SPDYE4A6NLX3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SPDYE4A6NLX3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SPDYE4A6NLX3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SPDYE4A6NLX3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SPDYE4A6NLX3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SPDYE4A6NLX3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SPDYE4A6NLX3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms