Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC010141.3-201ENST00000456659 717 ntBASIC14.69□□□□□ -0.06
LINC01549A6NIU2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC01549A6NIU2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.68□□□□□ -0.06
LINC01549A6NIU2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01549A6NIU2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01549A6NIU2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 AC133637.1-201ENST00000624115 1537 ntBASIC14.66□□□□□ -0.06
LINC01549A6NIU2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01549A6NIU2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.66□□□□□ -0.06
LINC01549A6NIU2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC01549A6NIU2 Z92544.1-202ENST00000571933 1220 ntBASIC14.65□□□□□ -0.06
LINC01549A6NIU2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms