Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEF25A6NGN4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.39■□□□□ 0.7
PRAMEF25A6NGN4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.39■□□□□ 0.7
PRAMEF25A6NGN4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEF25A6NGN4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEF25A6NGN4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 AC138907.5-202ENST00000569484 235 ntBASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRAMEF25A6NGN4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 AC010141.2-201ENST00000452426 721 ntBASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 AP001160.3-201ENST00000601484 763 ntBASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEF25A6NGN4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 AC137761.2-201ENST00000561729 223 ntBASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 AC145350.3-201ENST00000569033 163 ntBASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 AC022517.1-201ENST00000592429 346 ntBASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEF25A6NGN4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEF25A6NGN4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms