Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
SBNO1A3KN83 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SBNO1A3KN83 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
SBNO1A3KN83 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
SBNO1A3KN83 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
SBNO1A3KN83 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC28.29■■■□□ 2.12
SBNO1A3KN83 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
SBNO1A3KN83 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
SBNO1A3KN83 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
SBNO1A3KN83 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
SBNO1A3KN83 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SBNO1A3KN83 AC097493.4-201ENST00000641197 219 ntBASIC28.28■■■□□ 2.12
SBNO1A3KN83 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC28.28■■■□□ 2.12
SBNO1A3KN83 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SBNO1A3KN83 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SBNO1A3KN83 C1orf229-201ENST00000623686 2258 ntBASIC28.28■■■□□ 2.12
SBNO1A3KN83 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SBNO1A3KN83 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SBNO1A3KN83 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SBNO1A3KN83 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SBNO1A3KN83 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
SBNO1A3KN83 AC087499.1-201ENST00000418141 1075 ntBASIC28.27■■■□□ 2.12
SBNO1A3KN83 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SBNO1A3KN83 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SBNO1A3KN83 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC28.27■■■□□ 2.12
SBNO1A3KN83 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
SBNO1A3KN83 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
SBNO1A3KN83 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC28.26■■■□□ 2.12
SBNO1A3KN83 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SBNO1A3KN83 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC28.26■■■□□ 2.11
SBNO1A3KN83 AC026471.6-201ENST00000622954 1905 ntBASIC28.26■■■□□ 2.11
SBNO1A3KN83 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
SBNO1A3KN83 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 MIR4785-201ENST00000585005 73 ntBASIC28.25■■■□□ 2.11
SBNO1A3KN83 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC28.25■■■□□ 2.11
SBNO1A3KN83 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SBNO1A3KN83 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SBNO1A3KN83 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC28.24■■■□□ 2.11
SBNO1A3KN83 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC28.24■■■□□ 2.11
SBNO1A3KN83 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC28.24■■■□□ 2.11
SBNO1A3KN83 AP001412.1-201ENST00000608405 714 ntBASIC28.24■■■□□ 2.11
SBNO1A3KN83 AC113410.3-201ENST00000623366 203 ntBASIC28.24■■■□□ 2.11
SBNO1A3KN83 AL135905.2-201ENST00000584934 1404 ntBASIC28.24■■■□□ 2.11
SBNO1A3KN83 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SBNO1A3KN83 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SBNO1A3KN83 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC28.24■■■□□ 2.11
SBNO1A3KN83 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SBNO1A3KN83 AC239809.2-201ENST00000415381 517 ntBASIC28.24■■■□□ 2.11
SBNO1A3KN83 C2orf69P4-201ENST00000565394 541 ntBASIC28.24■■■□□ 2.11
SBNO1A3KN83 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SBNO1A3KN83 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 RCN1P1-201ENST00000400413 996 ntBASIC28.23■■■□□ 2.11
SBNO1A3KN83 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 TSPY15P-201ENST00000457163 923 ntBASIC28.23■■■□□ 2.11
SBNO1A3KN83 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SBNO1A3KN83 SNX21-213ENST00000614929 587 ntTSL 5 BASIC28.23■■■□□ 2.11
SBNO1A3KN83 AL023875.1-201ENST00000640777 796 ntBASIC28.23■■■□□ 2.11
SBNO1A3KN83 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
SBNO1A3KN83 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC28.22■■■□□ 2.11
SBNO1A3KN83 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SBNO1A3KN83 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC28.22■■■□□ 2.11
SBNO1A3KN83 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC28.22■■■□□ 2.11
SBNO1A3KN83 TK2-204ENST00000525974 1178 ntTSL 2 BASIC28.22■■■□□ 2.11
SBNO1A3KN83 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms