Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC073130.3-201ENST00000624389 2278 ntBASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV4S1A1TA0A5B7 LINC01521-201ENST00000504184 1943 ntBASIC16.58■□□□□ 0.25
TCRBV4S1A1TA0A5B7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRBV4S1A1TA0A5B7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRBV4S1A1TA0A5B7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRBV4S1A1TA0A5B7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MFSD11-216ENST00000590393 1141 ntBASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AL049796.1-201ENST00000565336 1766 ntBASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MIR663A-201ENST00000385250 93 ntBASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MYCNOS-205ENST00000641950 531 ntBASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AP006587.3-201ENST00000525742 1516 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AL157384.1-201ENST00000445995 2473 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC007322.1-201ENST00000426983 750 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CROCCP5-201ENST00000436658 830 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC010141.2-201ENST00000452426 721 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC138907.5-202ENST00000569484 235 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC231657.2-201ENST00000624556 255 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 AC003102.1-202ENST00000563394 1796 ntBASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TCRBV4S1A1TA0A5B7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV4S1A1TA0A5B7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms