Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 ZNRF2P3-201ENST00000424200 374 ntBASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC7A5P1-201ENST00000568957 537 ntBASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 RARRES2P11-201ENST00000635158 484 ntBASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 FEM1AP1-201ENST00000431297 1995 ntBASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 KRT19P1-201ENST00000405746 1186 ntBASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-4A0A1B0GX49 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 AC007225.1-201ENST00000566331 1836 ntBASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC25A24-204ENST00000569674 2357 ntBASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-4A0A1B0GX49 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 AC116050.2-201ENST00000612102 1779 ntBASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 GABARAPL3-202ENST00000624044 1851 ntBASIC14.55□□□□□ -0.08
TRBV6-4A0A1B0GX49 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms