Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF103-CHMP3A0A140T963 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 AL049796.1-201ENST00000565336 1766 ntBASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 AF213884.3-201ENST00000563833 479 ntBASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 AL355001.2-201ENST00000620617 1191 ntBASIC19.83■□□□□ 0.77
RNF103-CHMP3A0A140T963 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RNF103-CHMP3A0A140T963 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF103-CHMP3A0A140T963 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF103-CHMP3A0A140T963 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF103-CHMP3A0A140T963 PCDHAC2-203ENST00000615316 3011 ntBASIC19.83■□□□□ 0.76
RNF103-CHMP3A0A140T963 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.83■□□□□ 0.76
RNF103-CHMP3A0A140T963 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF103-CHMP3A0A140T963 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF103-CHMP3A0A140T963 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 MIR939-201ENST00000401314 82 ntBASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 RASA4CP-201ENST00000424092 1398 ntBASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF103-CHMP3A0A140T963 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 GABARAPL3-202ENST00000624044 1851 ntBASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms