Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV27A0A0K0K1C4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 SMG8-203ENST00000578922 2178 ntBASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 AL512631.2-201ENST00000604634 923 ntBASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 AC055733.4-201ENST00000638462 1354 ntBASIC14.6□□□□□ -0.07
TRBV27A0A0K0K1C4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 OR2A1-AS1-204ENST00000470435 602 ntBASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRBV27A0A0K0K1C4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV27A0A0K0K1C4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV27A0A0K0K1C4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
TRBV27A0A0K0K1C4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV27A0A0K0K1C4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.58□□□□□ -0.07
TRBV27A0A0K0K1C4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV27A0A0K0K1C4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV27A0A0K0K1C4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms