Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	URA10	YMR271C	684 nt		4.25	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	snR35	snR35	204 nt		4.25	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	MYO3	YKL129C	3819 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	YDR133C	YDR133C	336 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	VEL1	YGL258W	621 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	ILV5	YLR355C	1188 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	YNL338W	YNL338W	159 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	SRL1	YOR247W	633 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	FSH3	YOR280C	801 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	YBR201C-A	YBR201C-A	204 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	PCK1	YKR097W	1650 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	IMH1	YLR309C	2736 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	RTC1	YOL138C	4026 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	BAR1	YIL015W	1764 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	VPS73	YGL104C	1461 nt		4.24	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	HOP1	YIL072W	1818 nt		4.23	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	SNA4	YDL123W	423 nt		4.23	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	YHR139C-A	YHR139C-A	312 nt		4.23	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	ASC1	YMR116C	960 nt		4.23	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	SIL1	YOL031C	1266 nt		4.23	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	EAP1	YKL204W	1899 nt		4.23	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	OAF3	YKR064W	2592 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	YLR177W	YLR177W	1887 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	ACE2	YLR131C	2313 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	SLM2	YNL047C	1971 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	SNF12	YNR023W	1701 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	MVB12	YGR206W	306 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	YHR214W-A	YHR214W-A	486 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	YAR068W	YAR068W	486 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	RPL9B	YNL067W	576 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	RPL16B	YNL069C	597 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	PIS1	YPR113W	663 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	ATG21	YPL100W	1491 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	EXO70	YJL085W	1872 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	ULP1	YPL020C	1866 nt		4.22	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	PTA1	YAL043C	2358 nt		4.21	□□□□□ -1.73
TY4B-P	A0A0B7P3V8	CYM1	YDR430C	2970 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	ICR1	ICR1	3199 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YBP1	YBR216C	2025 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YDL228C	YDL228C	642 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YGL042C	YGL042C	306 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	APQ12	YIL040W	417 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YIL165C	YIL165C	360 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	CWC24	YLR323C	780 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	PGA1	YNL158W	597 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	snR13	snR13	124 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YCK2	YNL154C	1641 nt		4.21	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	XRS2	YDR369C	2565 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	DAP2	YHR028C	2457 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	PRM15	YMR278W	1869 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	HMF1	YER057C	390 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RPS8B	YER102W	603 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	PAM16	YJL104W	450 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YLR230W	YLR230W	306 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	SRC1	YML034W	2505 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RPN6	YDL097C	1305 nt		4.2	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YDR169C-A	YDR169C-A	150 nt		4.19	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	REC104	YHR157W	549 nt		4.19	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YHR212C	YHR212C	336 nt		4.19	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YIL066W-A	YIL066W-A	444 nt		4.19	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RPL15A	YLR029C	615 nt		4.19	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YAR060C	YAR060C	336 nt		4.19	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	MCM7	YBR202W	2538 nt		4.19	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RIA1	YNL163C	3333 nt		4.18	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YIL012W	YIL012W	342 nt		4.18	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RPA12	YJR063W	378 nt		4.18	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YOR011W-A	YOR011W-A	207 nt		4.18	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	PDR12	YPL058C	4536 nt		4.18	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	GPI1	YGR216C	1830 nt		4.18	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	VPS9	YML097C	1356 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	SAF1	YBR280C	1914 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	LCB5	YLR260W	2064 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RPO21	YDL140C	5202 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	ATP17	YDR377W	306 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RPL30	YGL030W	318 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YGR242W	YGR242W	309 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	PET191	YJR034W	327 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YOR131C	YOR131C	657 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YPL229W	YPL229W	621 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YDR338C	YDR338C	2088 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	APC5	YOR249C	2058 nt		4.17	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YCR023C	YCR023C	1836 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	NDD1	YOR372C	1665 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	HEF3	YNL014W	3135 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	MAL33	YBR297W	1407 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RPA34	YJL148W	702 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	ABF2	YMR072W	552 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	IRC23	YOR044W	474 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	snR42	snR42	351 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	RAD4	YER162C	2265 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	YPS6	YIR039C	1614 nt		4.16	□□□□□ -1.74
TY4B-P	A0A0B7P3V8	TRX3	YCR083W	384 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	RRT13	YER066W	558 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	YGL041C	YGL041C	204 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	OST6	YML019W	999 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	RPS7B	YNL096C	573 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	YBR085C-A	YBR085C-A	258 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	CEP3	YMR168C	1827 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	FKH2	YNL068C	2589 nt		4.15	□□□□□ -1.75
TY4B-P	A0A0B7P3V8	REB1	YBR049C	2433 nt		4.15	□□□□□ -1.75

Retrieved 100 of 7,029 protein–RNA pairs in 45 ms