Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV1-2A0A0B4J238 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV1-2A0A0B4J238 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV1-2A0A0B4J238 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV1-2A0A0B4J238 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV1-2A0A0B4J238 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV1-2A0A0B4J238 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 SYT6-210ENST00000641643 1587 ntBASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 SLC47A1P1-202ENST00000449666 945 ntBASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV1-2A0A0B4J238 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 AC092720.2-201ENST00000602388 1665 ntBASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 AC009299.2-201ENST00000482477 511 ntBASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 AC136469.2-201ENST00000623944 1028 ntBASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 AL020996.1-203ENST00000536896 2307 ntBASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV1-2A0A0B4J238 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
TRAV1-2A0A0B4J238 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 KRT16P3-201ENST00000439127 1283 ntBASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 MIR3621-201ENST00000580529 85 ntBASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 AC009237.3-201ENST00000393279 1427 ntBASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
TRAV1-2A0A0B4J238 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV1-2A0A0B4J238 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 AC055733.4-201ENST00000638462 1354 ntBASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 SERBP1P1-201ENST00000396021 1160 ntBASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 AC116562.4-201ENST00000641316 2276 ntBASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV1-2A0A0B4J238 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms